RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 IGKV3D-20A0A0C4DH25 116 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 NBR2O15453 112 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 ASIPP42127 132 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 TMEM187Q14656 261 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 ICE1Q9Y2F5 2266 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 IQCF6A8MYZ5 107 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 TEX45Q8NA69 505 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 ELOA3CA0A087WX78 387 aaPredicted RBP9.54□□□□□ -0.88
TTC28-201ENST00000397906 C1QTNF5Q9BXJ0 243 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 TOMM7Q9P0U1 55 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 F11RQ9Y624 299 aaKnown RBP9.54□□□□□ -0.88
TTC28-201ENST00000397906 A0A0G2JK05 382 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 C7orf66A4D0T2 115 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 CFDP00746 253 aaPredicted RBP9.54□□□□□ -0.88
TTC28-201ENST00000397906 SAA1P0DJI8 122 aaPredicted RBP9.54□□□□□ -0.88
TTC28-201ENST00000397906 SRSF7Q16629 238 aaKnown RBP eCLIP9.54□□□□□ -0.885e-12■■■■■ 38.5
TTC28-201ENST00000397906 RBFOX2O43251 390 aaKnown RBP eCLIP9.54□□□□□ -0.881e-8■■■■■ 31.8
TTC28-201ENST00000397906 VMO1Q7Z5L0 202 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 UBE2DNLQ8IWF7 75 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 BRD3OSQ6XYD6 125 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 MAPK1IP1LQ8NDC0 245 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 M0R143 59 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 KLRD1Q13241 179 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 TMEM30BQ3MIR4 351 aa9.54□□□□□ -0.88
TTC28-201ENST00000397906 HIST1H4GQ99525 98 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 SEC16AO15027 2179 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 TFF3Q07654 80 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 EGR1P18146 543 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 RPS20P60866 119 aaKnown RBP9.53□□□□□ -0.88
TTC28-201ENST00000397906 KIAA1644Q3SXP7 199 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 FAM166AQ6J272 317 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 OSR1Q8TAX0 266 aaPredicted RBP9.53□□□□□ -0.88
TTC28-201ENST00000397906 GATA2P23769 480 aaPredicted RBP9.53□□□□□ -0.88
TTC28-201ENST00000397906 CGAP01215 116 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 BEX4Q9NWD9 120 aaPredicted RBP9.53□□□□□ -0.88
TTC28-201ENST00000397906 IFI6P09912 130 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 A6NDN8 102 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 OR4D5Q8NGN0 318 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 FAM90A26D6RGX4 464 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 MALP21145 153 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 CYB5R2Q6BCY4 276 aa9.53□□□□□ -0.88
TTC28-201ENST00000397906 TCF20Q9UGU0 1960 aaKnown RBP9.52□□□□□ -0.88
TTC28-201ENST00000397906 IL6RP08887 468 aaPredicted RBP9.52□□□□□ -0.88
TTC28-201ENST00000397906 LEMD1Q68G75 181 aa9.52□□□□□ -0.88
TTC28-201ENST00000397906 NTN3O00634 580 aaPredicted RBP9.52□□□□□ -0.88
TTC28-201ENST00000397906 GGCTO75223 188 aaKnown RBP9.52□□□□□ -0.88
TTC28-201ENST00000397906 HLA-DRB1P01911 266 aa9.52□□□□□ -0.88
TTC28-201ENST00000397906 SCGB1A1P11684 91 aa9.52□□□□□ -0.88
TTC28-201ENST00000397906 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.88
TTC28-201ENST00000397906 TIMM23O14925 209 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 CIRBPQ14011 172 aaKnown RBP9.52□□□□□ -0.89
TTC28-201ENST00000397906 FAM71F2Q6NXP2 309 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 CHAC2Q8WUX2 184 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 C18orf15Q96N68 181 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 MRPL32Q9BYC8 188 aaKnown RBP9.52□□□□□ -0.89
TTC28-201ENST00000397906 TMEM167AQ8TBQ9 72 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 TMEM133Q9H2Q1 129 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 DICER1Q9UPY3 1922 aaKnown RBP9.52□□□□□ -0.89
TTC28-201ENST00000397906 TMEM14DPA8MWL7 114 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 ZNF585BQ52M93 769 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 ATG101Q9BSB4 218 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 COL4A6Q14031 1691 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 A0A0G2JNJ9 132 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 LHFPL4Q7Z7J7 247 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 Q9UFV3 132 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 RP1P56715 2156 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 SPSB4Q96A44 273 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 FHITP49789 147 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 PLPPR1Q8TBJ4 325 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 HSPB9Q9BQS6 159 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 TRAF4Q9BUZ4 470 aaPredicted RBP9.52□□□□□ -0.89
TTC28-201ENST00000397906 RPRMQ9NS64 109 aa9.52□□□□□ -0.89
TTC28-201ENST00000397906 GREB1LQ9C091 1923 aaPredicted RBP9.51□□□□□ -0.89
TTC28-201ENST00000397906 CD7P09564 240 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 MEF2CQ06413 473 aaPredicted RBP9.51□□□□□ -0.89
TTC28-201ENST00000397906 KIR3DL3Q8N743 410 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 NPIPB13A6NJU9 1138 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 NPIPB4C9JG80 1138 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 CD33P20138 364 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 CACNG7P62955 275 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 ZNF415Q09FC8 603 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 TGIF2-C20orf24A0A0A6YYL0 155 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 LEPROTL1O95214 131 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 RHOGP84095 191 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 RAMP3O60896 148 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 TDGF1P13385 188 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
TTC28-201ENST00000397906 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 IFI27L2Q9H2X8 130 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 TMEM170BQ5T4T1 132 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 PQLC2LA1A4F0 135 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 MRPS18CQ9Y3D5 142 aaKnown RBP9.51□□□□□ -0.89
TTC28-201ENST00000397906 CENPWQ5EE01 88 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 ZNF383Q8NA42 475 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 GPR61Q9BZJ8 451 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 H2BFSP57053 126 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 PRR30Q53SZ7 412 aaPredicted RBP9.51□□□□□ -0.89
TTC28-201ENST00000397906 PPP1R3EQ9H7J1 279 aa9.51□□□□□ -0.89
TTC28-201ENST00000397906 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms