RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 OR4C12Q96R67 309 aa15.52■□□□□ 0.08
PDLIM2-205ENST00000397761 CYTL1Q9NRR1 136 aa15.52■□□□□ 0.08
PDLIM2-205ENST00000397761 KIAA1456Q9P272 454 aa15.52■□□□□ 0.08
PDLIM2-205ENST00000397761 SOX21Q9Y651 276 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-205ENST00000397761 E7EUB6 86 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 LRRC75BQ2VPJ9 315 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 SPANXN5Q5MJ07 72 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 SLC51BQ86UW2 128 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 CLCC1Q96S66 551 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 HIPK2Q9H2X6 1198 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 SLA2Q9H6Q3 261 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 PLEKHA3Q9HB20 300 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 HEYLQ9NQ87 328 aaPredicted RBP15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 ZC4H2Q9NQZ6 224 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 C1RLQ9NZP8 487 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 FBXL17Q9UF56 701 aa15.52■□□□□ 0.07
PDLIM2-205ENST00000397761 C15orf62A8K5M9 175 aa15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 CD5LO43866 347 aa15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 HOXA1P49639 335 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 BSXQ3C1V8 233 aa15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 C10orf55Q5SWW7 151 aa15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 HAPLN4Q86UW8 402 aa15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 STX12Q86Y82 276 aa15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 TEX29Q8N6K0 151 aa15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 STRAPQ9Y3F4 350 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 U3KQ87 197 aa15.51■□□□□ 0.07
PDLIM2-205ENST00000397761 MTORP42345 2549 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 PMS2P5A8MQ11 134 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 FCN1O00602 326 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 OPN1MWP04001 364 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 OPN1MW2P0DN77 364 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 OPN1MW3P0DN78 364 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 ATP5IP56385 69 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 Q8N9W7 124 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 STOML3Q8TAV4 291 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 SSX3Q99909 188 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 ENY2Q9NPA8 101 aa15.5■□□□□ 0.07
PDLIM2-205ENST00000397761 SONP18583 2426 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 A0A1W2PN81 502 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 RGS13O14921 159 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 CST7O76096 145 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 SCAF4O95104 1147 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 CHRNA7P36544 502 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 RPL27AP46776 148 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 RPP30P78346 268 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 TMEM267Q0VDI3 215 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 TNXAQ16473 311 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 TUSC1Q2TAM9 212 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 CLEC9AQ6UXN8 241 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 SPNS3Q6ZMD2 512 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 TMEM170AQ8WVE7 144 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 HINT2Q9BX68 163 aa15.49■□□□□ 0.07
PDLIM2-205ENST00000397761 ACTL6BO94805 426 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 CA2P00918 260 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 METTL15P1P0C7V9 234 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 WT1-ASQ06250 92 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 ARL16Q0P5N6 197 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 PLGLAQ15195 96 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 BCL6BQ8N143 479 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 SLC24A4Q8NFF2 622 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 OR10W1Q8NGF6 305 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 RBM14Q96PK6 669 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 SRSF8Q9BRL6 282 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 PRDM13Q9H4Q3 707 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 WFDC1Q9HC57 220 aa15.48■□□□□ 0.07
PDLIM2-205ENST00000397761 IGLC7A0M8Q6 106 aa15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 HLA-DRB1P01911 266 aa15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 HTR2BP41595 481 aa15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 UBA52P62987 128 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 DEFB112Q30KQ8 113 aa15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 TEX261Q6UWH6 196 aa15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 ZNF562Q6V9R5 426 aa15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 OR5C1Q8NGR4 320 aa15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 SRSF12Q8WXF0 261 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 ZNF471Q9BX82 626 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-205ENST00000397761 A6NDX4 124 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 NCBP2LA6PVI3 153 aaKnown RBP15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 TEX22C9J3V5 150 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 PRSS46E5RG02 174 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 H3BUX3 64 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 FGF16O43320 207 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 IFNA10P01566 189 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 HBG1P69891 147 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 HBG2P69892 147 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 HSD17B13Q7Z5P4 300 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 UBAC2Q8NBM4 344 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 OR1S2Q8NGQ3 325 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 ST8SIA2Q92186 375 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 SMIM3Q9BZL3 60 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 ARV1Q9H2C2 271 aa15.46■□□□□ 0.07
PDLIM2-205ENST00000397761 JTBO76095 146 aa15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 CFDP00746 253 aaPredicted RBP15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 RNASE2P10153 161 aaKnown RBP15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 NPY1RP25929 384 aa15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 C2orf83Q53S99 150 aa15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 RPL7L1Q6DKI1 246 aaKnown RBP15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 MRPL41Q8IXM3 137 aaKnown RBP15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 TMEM217Q8N7C4 229 aa15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 ZNF114Q8NC26 417 aa15.46■□□□□ 0.06
PDLIM2-205ENST00000397761 SLC25A33Q9BSK2 321 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms