RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ARL16Q0P5N6 197 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 OR2B11Q5JQS5 317 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 NCR3LG1Q68D85 454 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 VMO1Q7Z5L0 202 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 HAPLN4Q86UW8 402 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 POLQO75417 2590 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 CSMD2Q7Z408 3487 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 ASH1LQ9NR48 2969 aaKnown RBP15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 LY86O95711 162 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 IGLV1-47P01700 117 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 IZUMO4Q1ZYL8 232 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 PRSS57Q6UWY2 283 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 TMEM186Q96B77 213 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 RSG1Q9BU20 258 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 SIRPDQ9H106 197 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 ABCA12Q86UK0 2595 aa15.67■□□□□ 0.1
PDLIM2-204ENST00000397760 A0A096LNT2 108 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 BRWD1-AS2P59051 145 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 FABP9Q0Z7S8 132 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 HLA-DRB5Q30154 266 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 ZNF833PQ6ZTB9 187 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 BEND2Q8NDZ0 799 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 TAF15Q92804 592 aaKnown RBP eCLIP15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 CIB3Q96Q77 187 aaPredicted RBP15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 VAX2Q9UIW0 290 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 INSIG2Q9Y5U4 225 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 NBPF19A0A087WUL8 3843 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 TGOLN2O43493 480 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 RAMP3O60896 148 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 TOX4O94842 621 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 IL3RAP26951 378 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 SLC38A11Q08AI6 406 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 RCC1LQ96I51 464 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 OR4C12Q96R67 309 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 PCGF1Q9BSM1 259 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 GNG13Q9P2W3 67 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 APCP25054 2843 aa15.66■□□□□ 0.1
PDLIM2-204ENST00000397760 MBP02144 154 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 THBS3P49746 956 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 ZNF137PP52743 207 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 KLRD1Q13241 179 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 ELOBQ15370 118 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 SPANXN5Q5MJ07 72 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 FAM90A2PQ658T7 463 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 OR11H6Q8NGC7 330 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 ST6GALNAC6Q969X2 333 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 ADTRPQ96IZ2 230 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 RBKSQ9H477 322 aa15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 FASNP49327 2511 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-204ENST00000397760 RNF223E7ERA6 249 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 BUB1B-PAK6H3BSN5 160 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 FCGR3BO75015 233 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 MSMBP08118 114 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 CT45A6P0DMU7 189 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 CT45A5P0DMU8 189 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 CT45A7P0DMV0 189 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 REG1BP48304 166 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 LOXL1Q08397 574 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 ZNF816Q0VGE8 651 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 ZNF726P1Q15940 193 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 HCP5Q6MZN7 132 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 FAM71F2Q6NXP2 309 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 RBMS3Q6XE24 437 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 KRTAP1-3Q8IUG1 177 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 ZNF383Q8NA42 475 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 OR4P4Q8NGL7 312 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 DDB2Q92466 427 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 Q96MF0 132 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 NAV2Q8IVL1 2488 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 MED13LQ71F56 2210 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 ANKRD17O75179 2603 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 B4DSR2 109 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 B2MP61769 119 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 PAX8Q06710 450 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 DIAPH2-AS1Q14236 149 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 C1orf159Q96HA4 380 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 TBX15Q96SF7 602 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 TMEM147Q9BVK8 224 aa15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 MRPL20Q9BYC9 149 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 AMMECR1Q9Y4X0 333 aaPredicted RBP15.64■□□□□ 0.09
PDLIM2-204ENST00000397760 VPS13CQ709C8 3753 aa15.63■□□□□ 0.09
PDLIM2-204ENST00000397760 HOXB4P17483 251 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-204ENST00000397760 KIR2DS2P43631 304 aa15.63■□□□□ 0.09
PDLIM2-204ENST00000397760 OR2B8PP59922 312 aa15.63■□□□□ 0.09
PDLIM2-204ENST00000397760 MAP1LC3B2A6NCE7 125 aa15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 S1PR2O95136 353 aa15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 RPS10P46783 165 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 RND2P52198 227 aa15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 CEBPGP53567 150 aa15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 TGIF2LXQ8IUE1 241 aa15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 MAP1LC3BQ9GZQ8 125 aa15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 CTDSP1Q9GZU7 261 aa15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 TMPRSS5Q9H3S3 457 aa15.62■□□□□ 0.09
PDLIM2-204ENST00000397760 FAM90A9PA6NNJ1 464 aa15.61■□□□□ 0.09
PDLIM2-204ENST00000397760 SOX15O60248 233 aa15.61■□□□□ 0.09
PDLIM2-204ENST00000397760 FBP1P09467 338 aa15.61■□□□□ 0.09
PDLIM2-204ENST00000397760 RAB11AP62491 216 aa15.61■□□□□ 0.09
PDLIM2-204ENST00000397760 VWC2Q2TAL6 325 aa15.61■□□□□ 0.09
PDLIM2-204ENST00000397760 MAPK1IP1LQ8NDC0 245 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms