RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CA2P00918 260 aa21.86■■□□□ 1.09
CPNE1-203ENST00000397442 HOXA1P49639 335 aaPredicted RBP21.86■■□□□ 1.09
CPNE1-203ENST00000397442 EWSR1Q01844 656 aaKnown RBP eCLIP21.86■■□□□ 1.09
CPNE1-203ENST00000397442 NHLH2Q02577 135 aa21.86■■□□□ 1.09
CPNE1-203ENST00000397442 OR10W1Q8NGF6 305 aa21.86■■□□□ 1.09
CPNE1-203ENST00000397442 RBM14Q96PK6 669 aaKnown RBP21.86■■□□□ 1.09
CPNE1-203ENST00000397442 OR4C12Q96R67 309 aa21.86■■□□□ 1.09
CPNE1-203ENST00000397442 YAE1D1Q9NRH1 226 aa21.86■■□□□ 1.09
CPNE1-203ENST00000397442 C1RLQ9NZP8 487 aa21.86■■□□□ 1.09
CPNE1-203ENST00000397442 SPANXN5Q5MJ07 72 aa21.85■■□□□ 1.09
CPNE1-203ENST00000397442 SPNS3Q6ZMD2 512 aa21.85■■□□□ 1.09
CPNE1-203ENST00000397442 TMEM219Q86XT9 240 aa21.85■■□□□ 1.09
CPNE1-203ENST00000397442 ZNF48Q96MX3 618 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-203ENST00000397442 PLEKHA3Q9HB20 300 aa21.85■■□□□ 1.09
CPNE1-203ENST00000397442 HEYLQ9NQ87 328 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-203ENST00000397442 OPCMLQ14982 345 aa21.85■■□□□ 1.09
CPNE1-203ENST00000397442 TEX29Q8N6K0 151 aa21.85■■□□□ 1.09
CPNE1-203ENST00000397442 SMR3AQ99954 134 aa21.85■■□□□ 1.09
CPNE1-203ENST00000397442 HIPK2Q9H2X6 1198 aa21.85■■□□□ 1.09
CPNE1-203ENST00000397442 NAV3Q8IVL0 2385 aa21.84■■□□□ 1.09
CPNE1-203ENST00000397442 A6NDX4 124 aa21.84■■□□□ 1.09
CPNE1-203ENST00000397442 ACTL6BO94805 426 aa21.84■■□□□ 1.09
CPNE1-203ENST00000397442 LY86O95711 162 aa21.84■■□□□ 1.09
CPNE1-203ENST00000397442 GNB1P62873 340 aa21.84■■□□□ 1.09
CPNE1-203ENST00000397442 TMEM14EPQ6UXP3 125 aa21.84■■□□□ 1.09
CPNE1-203ENST00000397442 SLC25A33Q9BSK2 321 aa21.84■■□□□ 1.09
CPNE1-203ENST00000397442 SLC25A31Q9H0C2 315 aa21.84■■□□□ 1.09
CPNE1-203ENST00000397442 SONP18583 2426 aaKnown RBP21.83■■□□□ 1.09
CPNE1-203ENST00000397442 INS-IGF2F8WCM5 200 aa21.83■■□□□ 1.09
CPNE1-203ENST00000397442 RPL27AP46776 148 aaKnown RBP21.83■■□□□ 1.09
CPNE1-203ENST00000397442 TMEM267Q0VDI3 215 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-203ENST00000397442 PRDM13Q9H4Q3 707 aa21.83■■□□□ 1.09
CPNE1-203ENST00000397442 ZC4H2Q9NQZ6 224 aa21.83■■□□□ 1.09
CPNE1-203ENST00000397442 C15orf62A8K5M9 175 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 CST7O76096 145 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 LY6EQ16553 131 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 TUSC1Q2TAM9 212 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 TMEM170AQ8WVE7 144 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 SRSF12Q8WXF0 261 aaKnown RBP21.82■■□□□ 1.08
CPNE1-203ENST00000397442 ENY2Q9NPA8 101 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 BCL2L11O43521 198 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 IGHV4-59P01825 116 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 METTL15P1P0C7V9 234 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 IER3P46695 156 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 WT1-ASQ06250 92 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 HAPLN4Q86UW8 402 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 C5orf56Q8N8D9 126 aa21.82■■□□□ 1.08
CPNE1-203ENST00000397442 STRAPQ9Y3F4 350 aaKnown RBP21.82■■□□□ 1.08
CPNE1-203ENST00000397442 TEX22C9J3V5 150 aa21.81■■□□□ 1.08
CPNE1-203ENST00000397442 SULT1A1P50225 295 aa21.81■■□□□ 1.08
CPNE1-203ENST00000397442 ZNF562Q6V9R5 426 aa21.81■■□□□ 1.08
CPNE1-203ENST00000397442 Q6YL49 198 aa21.81■■□□□ 1.08
CPNE1-203ENST00000397442 FBXL17Q9UF56 701 aa21.81■■□□□ 1.08
CPNE1-203ENST00000397442 MOB4Q9Y3A3 225 aa21.81■■□□□ 1.08
CPNE1-203ENST00000397442 A0A1W2PN81 502 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 IGLC7A0M8Q6 106 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 PMS2P5A8MQ11 134 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 HLA-DRB1P01911 266 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 AMY1AP04745 511 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 CHRNA7P36544 502 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 CX3CL1P78423 397 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 BAXQ07812 192 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 ARL16Q0P5N6 197 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 ARPC5LQ9BPX5 153 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 U3KQ87 197 aa21.8■■□□□ 1.08
CPNE1-203ENST00000397442 NDPQ00604 133 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 FXYD3Q14802 87 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 BSXQ3C1V8 233 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 RASL11BQ9BPW5 248 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 TMUB1Q9BVT8 246 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 CYTL1Q9NRR1 136 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 IGHV7-81A0A0B4J1V7 117 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 KANTRA0A1W2PQU2 76 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 FGF16O43320 207 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 CNIH1O95406 144 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 IFNA10P01566 189 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 C4BPBP20851 252 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 STX12Q86Y82 276 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 TMEM217Q8N7C4 229 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 SLC24A4Q8NFF2 622 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 SMIM3Q9BZL3 60 aa21.79■■□□□ 1.08
CPNE1-203ENST00000397442 LY6G6DO95868 133 aa21.78■■□□□ 1.08
CPNE1-203ENST00000397442 HSPB9Q9BQS6 159 aa21.78■■□□□ 1.08
CPNE1-203ENST00000397442 WFDC1Q9HC57 220 aa21.78■■□□□ 1.08
CPNE1-203ENST00000397442 TMEM160Q9NX00 188 aa21.78■■□□□ 1.08
CPNE1-203ENST00000397442 PITPNC1Q9UKF7 332 aa21.78■■□□□ 1.08
CPNE1-203ENST00000397442 AREGP15514 252 aa21.77■■□□□ 1.08
CPNE1-203ENST00000397442 IFITM2Q01629 132 aa21.77■■□□□ 1.08
CPNE1-203ENST00000397442 STPG2Q8N412 459 aa21.77■■□□□ 1.08
CPNE1-203ENST00000397442 OR5C1Q8NGR4 320 aa21.77■■□□□ 1.08
CPNE1-203ENST00000397442 PAIP2BQ9ULR5 123 aaKnown RBP21.77■■□□□ 1.08
CPNE1-203ENST00000397442 OR13C7P0DN81 318 aa21.76■■□□□ 1.07
CPNE1-203ENST00000397442 RNASE2P10153 161 aaKnown RBP21.76■■□□□ 1.07
CPNE1-203ENST00000397442 NPY1RP25929 384 aa21.76■■□□□ 1.07
CPNE1-203ENST00000397442 SRP14P37108 136 aaKnown RBP21.76■■□□□ 1.07
CPNE1-203ENST00000397442 RPP30P78346 268 aaKnown RBP21.76■■□□□ 1.07
CPNE1-203ENST00000397442 TAAR5O14804 337 aa21.75■■□□□ 1.07
CPNE1-203ENST00000397442 APELAP0DMC3 54 aa21.75■■□□□ 1.07
CPNE1-203ENST00000397442 HTR2BP41595 481 aa21.75■■□□□ 1.07
CPNE1-203ENST00000397442 ERHP84090 104 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 828.1 ms