RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 HLA-DRB5Q30154 266 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 ZNF833PQ6ZTB9 187 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 THNSL2Q86YJ6 484 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 LYG1Q8N1E2 194 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 SCGB1C1Q8TD33 95 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 PBDC1Q9BVG4 233 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 ZNRD1Q9P1U0 126 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 AMMECR1Q9Y4X0 333 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-207ENST00000397200 ACANP16112 2415 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 SNAPINO95295 136 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 IL6RP08887 468 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-207ENST00000397200 MDKP21741 143 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-207ENST00000397200 LGALS4P56470 323 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 SLC25A24Q6NUK1 477 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 OR4P4Q8NGL7 312 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 TAF15Q92804 592 aaKnown RBP eCLIP12.02□□□□□ -0.49
CAPN3-207ENST00000397200 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
CAPN3-207ENST00000397200 RSG1Q9BU20 258 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 TMEM147Q9BVK8 224 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 TMEM140Q9NV12 185 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 CSPG4Q6UVK1 2322 aa12.02□□□□□ -0.49
CAPN3-207ENST00000397200 IGHV3OR16-10A0A075B7F0 116 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 IGHV1-69DA0A0B4J2H0 117 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 C15orf61A6NNL5 157 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 C15orf62A8K5M9 175 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 IGHV1-69P01742 117 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 HBE1P02100 147 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 H2AFB1P0C5Y9 115 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 VDAC2P45880 294 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-207ENST00000397200 OR2B8PP59922 312 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 DHRS7BQ6IAN0 325 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-207ENST00000397200 FAM71F2Q6NXP2 309 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 TEX29Q8N6K0 151 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 NANPQ8TBE9 248 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 SMR3AQ99954 134 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 FOXA2Q9Y261 457 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-207ENST00000397200 FBXO7Q9Y3I1 522 aa12.01□□□□□ -0.49
CAPN3-207ENST00000397200 UBE2L5PA0A1B0GUS4 154 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 FAM74A7A6NL05 159 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 CEBPZOSA8MTT3 80 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 BUB1B-PAK6H3BSN5 160 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 NPFFO15130 113 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 IGHV4-38-2P0DP08 117 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 HTR1DP28221 377 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 FAM74A3Q4VXF1 159 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 KLF17Q5JT82 389 aaPredicted RBP12□□□□□ -0.49
CAPN3-207ENST00000397200 OR4A16Q8NH70 328 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 MBD3L1Q8WWY6 194 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
CAPN3-207ENST00000397200 TBL2Q9Y4P3 447 aaKnown RBP12□□□□□ -0.49
CAPN3-207ENST00000397200 LY6G6DO95868 133 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 CT45A6P0DMU7 189 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 CT45A5P0DMU8 189 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 CT45A7P0DMV0 189 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 CEACAM3P40198 252 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 NPBWR1P48145 328 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 CCL20P78556 96 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 TAGLNQ01995 201 aaKnown RBP12□□□□□ -0.49
CAPN3-207ENST00000397200 MINOS1Q5TGZ0 78 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 RUSC1-AS1Q66K80 236 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 OR8G2PQ6IF36 304 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
CAPN3-207ENST00000397200 OR10P1Q8NGE3 313 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 RPRMQ9NS64 109 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 TMEM14BQ9NUH8 114 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 DPM3Q9P2X0 92 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 MINOS1-NBL1R4GNA1 71 aa12□□□□□ -0.49
CAPN3-207ENST00000397200 PRSS46E5RG02 174 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 RBMXL2O75526 392 aaKnown RBP11.99□□□□□ -0.49
CAPN3-207ENST00000397200 SAA4P35542 130 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 PPT1P50897 306 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 ZNF137PP52743 207 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 TMEM41BQ5BJD5 291 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 OR4A47Q6IF82 309 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 BRD3OSQ6XYD6 125 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 SSX9Q7RTT3 188 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 LHFPL4Q7Z7J7 247 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 VKORC1L1Q8N0U8 176 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 RHOVQ96L33 236 aa11.99□□□□□ -0.49
CAPN3-207ENST00000397200 TLN2Q9Y4G6 2542 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 TRAV3A0A0B4J244 114 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 RBFOX3A6NFN3 312 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 HRASP01112 189 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 FSHBP01225 129 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 HNF1AP20823 631 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 BPIFB3P59826 476 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 ZNF726P1Q15940 193 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 ZNF506Q5JVG8 444 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 FAM120AOSQ5T036 256 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 CLRN3Q8NCR9 226 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 RPEQ96AT9 228 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 EIF5A2Q9GZV4 153 aaKnown RBP11.98□□□□□ -0.49
CAPN3-207ENST00000397200 SLC35B3Q9H1N7 401 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 TCF19Q9Y242 345 aa11.98□□□□□ -0.49
CAPN3-207ENST00000397200 LY6LH3BQJ8 138 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 IFNA17P01571 189 aa11.97□□□□□ -0.49
CAPN3-207ENST00000397200 RAB2AP61019 212 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms