RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PRR27Q6MZM9 219 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 C1orf210Q8IVY1 113 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 TCTEX1D1Q8N7M0 179 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 HSD17B10Q99714 261 aaKnown RBP7.61□□□□□ -1.19
CAPN3-206ENST00000397163 OBP2BQ9NPH6 170 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 WASHC3Q9Y3C0 194 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 TNRC6BQ9UPQ9 1833 aaKnown RBP7.6□□□□□ -1.19
CAPN3-206ENST00000397163 DNAJC13O75165 2243 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 SRIP30626 198 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 PLGLB1Q02325 96 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 Q0VG73 95 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 FXYD3Q14802 87 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 SLC35E4Q6ICL7 350 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 ABHD12Q8N2K0 398 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 NEUROG1Q92886 237 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 SEPSECSQ9HD40 501 aaKnown RBP7.6□□□□□ -1.19
CAPN3-206ENST00000397163 LOXL2Q9Y4K0 774 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 MT-CO2P00403 227 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 CELA3BP08861 270 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 MRPL49Q13405 166 aaKnown RBP7.6□□□□□ -1.19
CAPN3-206ENST00000397163 ZNF718Q3SXZ3 478 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 SPATA31B1PQ5VZV4 182 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 MRPL54Q6P161 138 aaKnown RBP7.6□□□□□ -1.19
CAPN3-206ENST00000397163 VKORC1L1Q8N0U8 176 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 TMEM105Q8N8V8 129 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 SARAFQ96BY9 339 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 EAF1Q96JC9 268 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-206ENST00000397163 GP6Q9HCN6 339 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 MUC3AQ02505 3323 aa7.6□□□□□ -1.19
CAPN3-206ENST00000397163 TRAV30A0A087WSZ9 112 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 IGLC7A0M8Q6 106 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 CA2P00918 260 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 GPR12P47775 334 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 SLC25A40Q8TBP6 338 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 COQ2Q96H96 371 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 CLEC7AQ9BXN2 247 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 PRR33A8MZF0 331 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 MMP23AO75900 390 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 IGLL1P15814 213 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 ERVK-16P61578 105 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 RHOBP62745 196 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 FOXF2Q12947 444 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 ABHD17BQ5VST6 288 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 STUMQ69YW2 141 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 TMEM108Q6UXF1 575 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 NIT1Q86X76 327 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 OR4P4Q8NGL7 312 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 OR13A1Q8NGR1 328 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 CORO2AQ92828 525 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 BORCS7Q96B45 105 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 KCNS1Q96KK3 526 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 ZNF430Q9H8G1 570 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-206ENST00000397163 SMPD2O60906 423 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 FOXH1O75593 365 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 GNG4P50150 75 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 SELENOVP59797 346 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 ZNF841Q6ZN19 808 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 WDR31Q8NA23 367 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 CT55Q8WUE5 264 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 DCTN5Q9BTE1 182 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 TTTY12Q9BZ98 90 aa7.59□□□□□ -1.19
CAPN3-206ENST00000397163 TRBV9A0A0B4J1U6 114 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 IGHV2-26A0A0B4J1V2 119 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 IGHV1-69-2A0A0G2JMI3 117 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 C9JCJ5 164 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 J3QW42 95 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 NTN3O00634 580 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-206ENST00000397163 SPINT2O43291 252 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 ACTL6BO94805 426 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 EDDM3AQ14507 147 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 EFNB3Q15768 340 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 MORN2Q502X0 79 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 Q6ZR03 302 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 TMEM251Q8N6I4 163 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 KLHDC1Q8N7A1 406 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 STPG3Q8N7X2 389 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 OR4F17Q8NGA8 305 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 GNB1LQ9BYB4 327 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 GNG12Q9UBI6 72 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 TRGV10A0A0A0MS01 117 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 M0R1X1 148 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 CIDEAO60543 219 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 ZNF324O75467 553 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-206ENST00000397163 CGAP01215 116 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 CENPWQ5EE01 88 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 ZNF766Q5HY98 468 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 DCAF12Q5T6F0 453 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 DOLPP1Q86YN1 238 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 NAA38Q9BRA0 125 aaKnown RBP7.58□□□□□ -1.2
CAPN3-206ENST00000397163 MCRIP2Q9BUT9 160 aaKnown RBP7.58□□□□□ -1.2
CAPN3-206ENST00000397163 NPVFQ9HCQ7 196 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 METRNQ9UJH8 293 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 V9GYV3 84 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 AHCTF1Q8WYP5 2266 aa7.58□□□□□ -1.2
CAPN3-206ENST00000397163 GAGE12BA1L429 117 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 H0Y8G0 127 aa7.57□□□□□ -1.2
CAPN3-206ENST00000397163 TAX1BP3O14907 124 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms