RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 BRS3P32247 399 aa12.24□□□□□ -0.45
RAPGEF4-201ENST00000397081 LCN12Q6JVE5 192 aa12.24□□□□□ -0.45
RAPGEF4-201ENST00000397081 Q6ZWC4 215 aa12.24□□□□□ -0.45
RAPGEF4-201ENST00000397081 RBMXL3Q8N7X1 1067 aaKnown RBP12.24□□□□□ -0.45
RAPGEF4-201ENST00000397081 OR2D3Q8NGH3 330 aa12.24□□□□□ -0.45
RAPGEF4-201ENST00000397081 TRBV20OR9-2A0A075B6H5 130 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 CA2P00918 260 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 DEFB124Q8NES8 71 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 MGST2Q99735 147 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 AGMATQ9BSE5 352 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 PCP4P48539 62 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 MRPS11P82912 194 aaKnown RBP12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 Q6ZVH6 145 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 RNASEH2CQ8TDP1 164 aaKnown RBP12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 DIRC2Q96SL1 478 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 GGTLC1Q9BX51 225 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 J3QR06 171 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 TDGF1P3P51864 188 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 ZNF137PP52743 207 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 VAMP3Q15836 100 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 VWA1Q6PCB0 445 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 FER1L6-AS2Q96M78 137 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 CSN3P07498 182 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 IGHV1-2P23083 117 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 ACP7Q6ZNF0 438 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 WIPI2Q9Y4P8 454 aa12.23□□□□□ -0.45
RAPGEF4-201ENST00000397081 Q6ZR03 302 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 LINC00479Q96M42 142 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 SSBP4Q9BWG4 385 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 ZNF355PQ9NSJ1 428 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 ZNRD1Q9P1U0 126 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 ORM2P19652 201 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 EFNB3Q15768 340 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 IBA57Q5T440 356 aaKnown RBP12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 ETFRF1Q6IPR1 90 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 GNB4Q9HAV0 340 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 IL36BQ9NZH7 164 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 IGKV3D-15A0A087WSY6 115 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 SPAARA0A1B0GVQ0 90 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 C20orf202A1L168 122 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 CHRNB4P30926 498 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 RAB7AP51149 207 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 SRSF7Q16629 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 TMEM178AQ8NBL3 297 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 DNAJC4Q9NNZ3 241 aa12.22□□□□□ -0.45
RAPGEF4-201ENST00000397081 MLNRO43193 412 aa12.21□□□□□ -0.45
RAPGEF4-201ENST00000397081 OR4S2Q8NH73 311 aa12.21□□□□□ -0.45
RAPGEF4-201ENST00000397081 C5orf30Q96GV9 206 aa12.21□□□□□ -0.45
RAPGEF4-201ENST00000397081 M0R2Z0 102 aa12.21□□□□□ -0.45
RAPGEF4-201ENST00000397081 SELENOVP59797 346 aa12.21□□□□□ -0.45
RAPGEF4-201ENST00000397081 PAFAH1B2P68402 229 aa12.21□□□□□ -0.45
RAPGEF4-201ENST00000397081 NABP2Q9BQ15 211 aa12.21□□□□□ -0.45
RAPGEF4-201ENST00000397081 NRN1Q9NPD7 142 aa12.21□□□□□ -0.45
RAPGEF4-201ENST00000397081 C9orf172C9J069 976 aa12.21□□□□□ -0.46
RAPGEF4-201ENST00000397081 RAB4AP20338 218 aa12.21□□□□□ -0.46
RAPGEF4-201ENST00000397081 OPRK1P41145 380 aa12.21□□□□□ -0.46
RAPGEF4-201ENST00000397081 UBE2G1P62253 170 aa12.21□□□□□ -0.46
RAPGEF4-201ENST00000397081 Q8NFD4 153 aa12.21□□□□□ -0.46
RAPGEF4-201ENST00000397081 DUTP33316 252 aaKnown RBP12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 ZNF146Q15072 292 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 COL5A1-AS1Q5SY13 56 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 WDR82Q6UXN9 313 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 OPN3Q9H1Y3 402 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 SLC45A2Q9UMX9 530 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 OR51B2Q9Y5P1 312 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 COX7A2P2O60397 106 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 TDGF1P13385 188 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 OR2V2Q96R30 315 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 MIEN1Q9BRT3 115 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 APCSP02743 223 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 PRB3Q04118 309 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 EAF1Q96JC9 268 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 IL19Q9UHD0 177 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 PYGO2Q9BRQ0 406 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 MBNL3Q9NUK0 354 aaKnown RBP12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 CBY1Q9Y3M2 126 aa12.2□□□□□ -0.46
RAPGEF4-201ENST00000397081 TRAV5A0A0B4J249 113 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 NTN3O00634 580 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 REG1AP05451 166 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 TAS2R45P59539 299 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 NRN1LQ496H8 165 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 SPRR3Q9UBC9 169 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 APC2O95996 2303 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 M0QZK8 103 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 DLEU1O43261 78 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 ADH4P08319 380 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 STUMQ69YW2 141 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 SLC35E1Q96K37 410 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 CCL13Q99616 98 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 ZNF835Q9Y2P0 537 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 TRBV6-6A0A0A6YYG2 114 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
RAPGEF4-201ENST00000397081 TMPRSS2O15393 492 aa12.18□□□□□ -0.46
RAPGEF4-201ENST00000397081 CYC1P08574 325 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms