RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PPIAL4FP0DN26 164 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 PGFP49763 221 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 RASL10BQ96S79 203 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 PPIAL4AQ9Y536 164 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 ANAPC1Q9H1A4 1944 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 TRAV5A0A0B4J249 113 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 MOSP00540 346 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 NR2C2APQ86WQ0 139 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 OR2H2O95918 312 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 IGLV3-25P01717 112 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 TPRX1Q8N7U7 411 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 TMEM171Q8WVE6 324 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 TMEM86BQ8N661 226 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 MARF1Q9Y4F3 1742 aaKnown RBP8.86□□□□□ -0.99
COL4A4-201ENST00000396625 TRAV2A0A0B4J234 112 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 MUC21A0A0G2JKD1 596 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 MUC21A0A140T8X8 626 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 KBTBD11-OT1A0A1B0GTJ5 212 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 SPEM2Q0P670 501 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 MUC21Q5SSG8 566 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 ZNF784Q8NCA9 323 aaPredicted RBP8.86□□□□□ -0.99
COL4A4-201ENST00000396625 NPCDR1Q9BY65 106 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 FGF12P61328 243 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 UNC119Q13432 240 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 IL36BQ9NZH7 164 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 DPM2O94777 84 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 IFI27P40305 119 aaPredicted RBP8.85□□□□□ -0.99
COL4A4-201ENST00000396625 LINC01555Q8NAE3 123 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 AQP3Q92482 292 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 EPDR1Q9UM22 224 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 A0A1W2PQD3 144 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 IGHV3-48P01763 117 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 C1QL3Q5VWW1 255 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 MBD1Q9UIS9 605 aaPredicted RBP8.85□□□□□ -0.99
COL4A4-201ENST00000396625 PAPPA2Q9BXP8 1791 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 RPL34P49207 117 aaKnown RBP8.85□□□□□ -0.99
COL4A4-201ENST00000396625 Q6AWC8 147 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 APCDD1LQ8NCL9 501 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 C5orf66Q9H5L9 145 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 LIFP15018 202 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 TDGF1P3P51864 188 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 APOBEC4Q8WW27 367 aaKnown RBP8.85□□□□□ -0.99
COL4A4-201ENST00000396625 IMMP2LQ96T52 175 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 NABP2Q9BQ15 211 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 PRDM13Q9H4Q3 707 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 FGFRL1Q8N441 504 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 DXOO77932 396 aaKnown RBP8.85□□□□□ -0.99
COL4A4-201ENST00000396625 RIF1Q5UIP0 2472 aaKnown RBP8.85□□□□□ -0.99
COL4A4-201ENST00000396625 TDHQ8IZJ6 230 aa8.85□□□□□ -0.99
COL4A4-201ENST00000396625 SEPSECSQ9HD40 501 aaKnown RBP8.84□□□□□ -0.99
COL4A4-201ENST00000396625 AHDC1Q5TGY3 1603 aaPredicted RBP8.84□□□□□ -0.99
COL4A4-201ENST00000396625 SMIM8Q96KF7 97 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 TMEM74BQ9NUR3 256 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 C2CD4DB7Z1M9 353 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 ZG16O60844 167 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 PGLYRP1O75594 196 aaPredicted RBP8.84□□□□□ -0.99
COL4A4-201ENST00000396625 C2orf68Q2NKX9 166 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 WDYHV1Q96HA8 205 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 CHODLQ9H9P2 273 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 LHX9Q9NQ69 397 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 LAMTOR3Q9UHA4 124 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 CCL21O00585 134 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 FSTP19883 344 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 NHLRC3Q5JS37 347 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 ITLN2Q8WWU7 325 aaPredicted RBP8.84□□□□□ -0.99
COL4A4-201ENST00000396625 PAX1P15863 534 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 TSPAN7P41732 249 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 CALYQ9NYX4 217 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 SERGEFQ9UGK8 458 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 MGST3O14880 152 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 RTN4RL2Q86UN3 420 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 NPIPB11E5RHQ5 1161 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 SUMO4Q6EEV6 95 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 JMJD8Q96S16 334 aa8.84□□□□□ -0.99
COL4A4-201ENST00000396625 MPV17P39210 176 aa8.84□□□□□ -1
COL4A4-201ENST00000396625 H2BFSP57053 126 aa8.84□□□□□ -1
COL4A4-201ENST00000396625 OR11H4Q8NGC9 324 aa8.84□□□□□ -1
COL4A4-201ENST00000396625 TNFRSF14Q92956 283 aa8.84□□□□□ -1
COL4A4-201ENST00000396625 COQ2Q96H96 371 aa8.84□□□□□ -1
COL4A4-201ENST00000396625 NRN1Q9NPD7 142 aa8.84□□□□□ -1
COL4A4-201ENST00000396625 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 IGLV3-16A0A075B6K0 115 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 IGHV1OR21-1A0A087WYE8 117 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 ESDP10768 282 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 ICAM4Q14773 271 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 LY6EQ16553 131 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 CIARTQ8N365 385 aaPredicted RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 GPHA2Q96T91 129 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 IGHV3-66A0A0C4DH42 116 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 IZUMO1RA6ND01 250 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 IRF3Q14653 427 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 EFNB1P98172 346 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 TRIP6Q15654 476 aaKnown RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 MYEOVQ96EZ4 313 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 RCC1LQ96I51 464 aaKnown RBP8.83□□□□□ -1
COL4A4-201ENST00000396625 KLHDC2Q9Y2U9 406 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 SCO2A0A1W2PP80 73 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 SERF1AO75920 110 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 BGLAPP02818 100 aa8.83□□□□□ -1
COL4A4-201ENST00000396625 TM4SF4P48230 202 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms