RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 A0A1W2PRE2 83 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 H3BRM9 83 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 IGKV1D-33P01593 117 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 IGKV1-33P01594 117 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 CRYBA2P53672 197 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 PARLQ9H300 379 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 OVOL1O14753 267 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 VDAC2P45880 294 aaPredicted RBP13.12□□□□□ -0.31
GNE-202ENST00000396594 ZNF880Q6PDB4 577 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 SPSB3Q6PJ21 355 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 IGHV1-18A0A0C4DH31 117 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 PEX7O00628 323 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 SRSF12Q8WXF0 261 aaKnown RBP13.12□□□□□ -0.31
GNE-202ENST00000396594 MYO7AQ13402 2215 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 A0A087X0M5 115 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 A0A1B0GX30 115 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 PPBPP02775 128 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 MORN2Q502X0 79 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 C2orf88Q9BSF0 95 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 C7orf69Q9H7B7 122 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 ZNF207O43670 478 aaKnown RBP13.12□□□□□ -0.31
GNE-202ENST00000396594 H2BFSP57053 126 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 ZNRF1Q8ND25 227 aa13.12□□□□□ -0.31
GNE-202ENST00000396594 RTBDNQ9BSG5 229 aaPredicted RBP13.12□□□□□ -0.31
GNE-202ENST00000396594 TMEM155Q4W5P6 130 aa13.11□□□□□ -0.31
GNE-202ENST00000396594 MSRB2Q9Y3D2 182 aa13.11□□□□□ -0.31
GNE-202ENST00000396594 SLC25A28Q96A46 364 aa13.11□□□□□ -0.31
GNE-202ENST00000396594 FOXL2P58012 376 aa13.11□□□□□ -0.31
GNE-202ENST00000396594 Q6ZS92 163 aa13.11□□□□□ -0.31
GNE-202ENST00000396594 CBLN2Q8IUK8 224 aa13.11□□□□□ -0.31
GNE-202ENST00000396594 METRNQ9UJH8 293 aa13.11□□□□□ -0.31
GNE-202ENST00000396594 RAMP1O60894 148 aa13.11□□□□□ -0.31
GNE-202ENST00000396594 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
GNE-202ENST00000396594 TRGV11A0A075B6L2 103 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 OR9G9P0C7N8 305 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 GGNQ86UU5 652 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 MRPL20Q9BYC9 149 aaKnown RBP13.1□□□□□ -0.31
GNE-202ENST00000396594 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 CEACAM4O75871 244 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 WNT2P09544 360 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 RCC1LQ96I51 464 aaKnown RBP13.1□□□□□ -0.31
GNE-202ENST00000396594 OR4C46A6NHA9 309 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 A0A0G2JMM0 328 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.1□□□□□ -0.31
GNE-202ENST00000396594 A0A1W2PPB8 328 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 A0A1W2PRS3 328 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 KIR3DP1A8MWS1 328 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 CRYBB3P26998 211 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 CFPP27918 469 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 EFNB1P98172 346 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 SPRR3Q9UBC9 169 aa13.1□□□□□ -0.31
GNE-202ENST00000396594 ETV2O00321 342 aaPredicted RBP13.09□□□□□ -0.31
GNE-202ENST00000396594 HEPN1Q6WQI6 88 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 FOXA2Q9Y261 457 aaPredicted RBP13.09□□□□□ -0.31
GNE-202ENST00000396594 ZNF324O75467 553 aaPredicted RBP13.09□□□□□ -0.31
GNE-202ENST00000396594 CD69Q07108 199 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 ZNF525Q8N782 197 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 RPP21Q9H633 154 aaKnown RBP13.09□□□□□ -0.31
GNE-202ENST00000396594 RPUSD1Q9UJJ7 312 aaKnown RBP13.09□□□□□ -0.31
GNE-202ENST00000396594 TCRBV4S1A1TA0A5B7 111 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 RPL39P5Q59GN2 51 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 FAM216BQ8N7L0 139 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 PARD6GQ9BYG4 376 aaPredicted RBP13.09□□□□□ -0.31
GNE-202ENST00000396594 IGKV1D-43A0A0B4J1Z2 117 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 MED19A0JLT2 244 aaPredicted RBP13.09□□□□□ -0.31
GNE-202ENST00000396594 FAM181BA6NEQ2 426 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 ZP1P60852 638 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 C2orf83Q53S99 150 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 CENPWQ5EE01 88 aa13.09□□□□□ -0.31
GNE-202ENST00000396594 ISOC2Q96AB3 205 aa13.08□□□□□ -0.31
GNE-202ENST00000396594 ZNF256Q9Y2P7 627 aaPredicted RBP13.08□□□□□ -0.31
GNE-202ENST00000396594 A0A1B0GUT8 65 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 GOLT1AQ6ZVE7 132 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 GEMIN7Q9H840 131 aaKnown RBP13.08□□□□□ -0.32
GNE-202ENST00000396594 IGHV3-21A0A0B4J1V1 117 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 A0A1B0GW64 132 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 HIST1H1AQ02539 215 aaPredicted RBP13.08□□□□□ -0.32
GNE-202ENST00000396594 OR10S1Q8NGN2 331 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 FBXL15Q9H469 300 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 LY6EQ16553 131 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 RNF151Q2KHN1 245 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 TMEM42Q69YG0 159 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 SLC25A34Q6PIV7 304 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 IGFL3Q6UXB1 125 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 ZNF841Q6ZN19 808 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 NEUROG1Q92886 237 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 DEPPQ9NTK1 212 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 TNFRSF18Q9Y5U5 241 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 SLC25A15Q9Y619 301 aa13.08□□□□□ -0.32
GNE-202ENST00000396594 TMSB15BA0A087X1C1 80 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 C17orf98A8MV24 154 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 GAS1P54826 345 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 BMPERQ8N8U9 685 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 OR11H4Q8NGC9 324 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 ZNF324BQ6AW86 544 aaPredicted RBP13.07□□□□□ -0.32
GNE-202ENST00000396594 NABP1Q96AH0 204 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 PRELID3AQ96N28 172 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 OSTCQ9NRP0 149 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 PCM1Q15154 2024 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms