RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 OR9G1Q8NH87 305 aa11.92□□□□□ -0.5
COL4A3-202ENST00000396578 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
COL4A3-202ENST00000396578 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
COL4A3-202ENST00000396578 SPINT1O43278 529 aa11.92□□□□□ -0.5
COL4A3-202ENST00000396578 IGHV4-39P01824 125 aa11.92□□□□□ -0.5
COL4A3-202ENST00000396578 RPP21Q9H633 154 aaKnown RBP11.92□□□□□ -0.5
COL4A3-202ENST00000396578 HOXB1P14653 301 aaPredicted RBP11.91□□□□□ -0.5
COL4A3-202ENST00000396578 ZNF729A6NN14 1252 aaPredicted RBP11.91□□□□□ -0.5
COL4A3-202ENST00000396578 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 ELOVL5Q9NYP7 299 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 HAX1O00165 279 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 SLC17A3O00476 420 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 SDK2Q58EX2 2172 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 CGAP01215 116 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 YBX2Q9Y2T7 364 aaKnown RBP11.91□□□□□ -0.5
COL4A3-202ENST00000396578 DOCK4Q8N1I0 1966 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 IGLV1-36A0A0B4J1U3 117 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 ZNF708P17019 499 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 PAX2Q02962 417 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 DRAM1Q8N682 238 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 KLF14Q8TD94 323 aaPredicted RBP11.91□□□□□ -0.5
COL4A3-202ENST00000396578 TMEM74BQ9NUR3 256 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 ABCA7Q8IZY2 2146 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 NDUFS8O00217 210 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 GPR183P32249 361 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 STARD6P59095 220 aa11.91□□□□□ -0.5
COL4A3-202ENST00000396578 IL6RP08887 468 aaPredicted RBP11.9□□□□□ -0.5
COL4A3-202ENST00000396578 CKS1BP61024 79 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 FAM19A2Q8N3H0 131 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 RPRMQ9NS64 109 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 IGHMP01871 453 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 UNQ9370/PRO34162Q6UXP9 181 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 AMELYQ99218 206 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 SIGMAR1Q99720 223 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 MEGF9Q9H1U4 602 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 TMEM106BQ9NUM4 274 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 HIGD1CA8MV81 97 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 EGR1P18146 543 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 TSPAN7P41732 249 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 CENPVQ7Z7K6 275 aaPredicted RBP11.9□□□□□ -0.5
COL4A3-202ENST00000396578 PHLDA1Q8WV24 401 aaPredicted RBP11.9□□□□□ -0.5
COL4A3-202ENST00000396578 IMMP2LQ96T52 175 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 FNDC4Q9H6D8 234 aaPredicted RBP11.9□□□□□ -0.5
COL4A3-202ENST00000396578 ITGBL1O95965 494 aaPredicted RBP11.9□□□□□ -0.5
COL4A3-202ENST00000396578 MED12Q93074 2177 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 TRAV12-3A0A0B4J271 114 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 LEPP41159 167 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 LY6EQ16553 131 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 ASPHD2Q6ICH7 369 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 TOMM7Q9P0U1 55 aa11.9□□□□□ -0.5
COL4A3-202ENST00000396578 COX6B1P14854 86 aa11.9□□□□□ -0.51
COL4A3-202ENST00000396578 SEMA5BQ9P283 1151 aa11.9□□□□□ -0.51
COL4A3-202ENST00000396578 CD160O95971 181 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 CD69Q07108 199 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 LINC00614P0C842 121 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 MALP21145 153 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 RIPPLY2Q5TAB7 128 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 SCARF2Q96GP6 870 aaPredicted RBP11.89□□□□□ -0.51
COL4A3-202ENST00000396578 H3BUT2 72 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 LAMTOR2Q9Y2Q5 125 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 DUX3Q96PT4 197 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 CTSSP25774 331 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 Q5BKY6 102 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 CHODLQ9H9P2 273 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 G6PC2Q9NQR9 355 aa11.89□□□□□ -0.51
COL4A3-202ENST00000396578 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 KIR3DL3Q8N743 410 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 TDGF1P13385 188 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 ZNF501Q96CX3 271 aaPredicted RBP11.88□□□□□ -0.51
COL4A3-202ENST00000396578 NYNRINQ9P2P1 1898 aaKnown RBP11.88□□□□□ -0.51
COL4A3-202ENST00000396578 PAX1P15863 534 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 UCNP55089 124 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 FER1L6-AS1Q8NA97 138 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 OR10J3Q5JRS4 329 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 CIARTQ8N365 385 aaPredicted RBP11.88□□□□□ -0.51
COL4A3-202ENST00000396578 HEATR5AQ86XA9 2040 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 FBLN7Q53RD9 439 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 PRDM13Q9H4Q3 707 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 PF4P02776 101 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 OR4X2Q8NGF9 303 aa11.88□□□□□ -0.51
COL4A3-202ENST00000396578 RNASE4P34096 147 aaKnown RBP11.87□□□□□ -0.51
COL4A3-202ENST00000396578 NHSL1Q5SYE7 1610 aa11.87□□□□□ -0.51
COL4A3-202ENST00000396578 IGKV1-8A0A0C4DH67 115 aa11.87□□□□□ -0.51
COL4A3-202ENST00000396578 ZNF257Q9Y2Q1 563 aa11.87□□□□□ -0.51
COL4A3-202ENST00000396578 WISP3O95389 354 aaPredicted RBP11.87□□□□□ -0.51
COL4A3-202ENST00000396578 COX5BP10606 129 aa11.87□□□□□ -0.51
COL4A3-202ENST00000396578 TIMM23BQ5SRD1 257 aa11.87□□□□□ -0.51
COL4A3-202ENST00000396578 RNASEH2CQ8TDP1 164 aaKnown RBP11.87□□□□□ -0.51
COL4A3-202ENST00000396578 RNF115Q9Y4L5 304 aa11.87□□□□□ -0.51
COL4A3-202ENST00000396578 TRGV3P03979 118 aa11.87□□□□□ -0.51
COL4A3-202ENST00000396578 C1QCP02747 245 aa11.87□□□□□ -0.51
COL4A3-202ENST00000396578 SRSF6Q13247 344 aaKnown RBP11.87□□□□□ -0.51
COL4A3-202ENST00000396578 COQ2Q96H96 371 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms