RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZNF488Q96MN9 340 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 FAM215AQ9Y5M1 114 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 KLF2Q9Y5W3 355 aaPredicted RBP2.82□□□□□ -1.96
VPS13C-203ENST00000395896 MLNRO43193 412 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 IGHV1-46P01743 117 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 GYPAP02724 150 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 CELA3BP08861 270 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 HKR1P10072 659 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 PDCD1Q15116 288 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 TNXAQ16473 311 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM255AQ5JRV8 349 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 DCAF12L2Q5VW00 463 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 RELL2Q8NC24 303 aaPredicted RBP2.82□□□□□ -1.96
VPS13C-203ENST00000395896 OR4D5Q8NGN0 318 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 LHFPL5Q8TAF8 219 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 ELOVL1Q9BW60 279 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 SEC14L6B5MCN3 397 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 CRYBA1P05813 215 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 CXCL2P19875 107 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 DLX6P56179 175 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 PRSS33Q8NF86 280 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 OR11H4Q8NGC9 324 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF430Q9H8G1 570 aaPredicted RBP2.82□□□□□ -1.96
VPS13C-203ENST00000395896 FOXA2Q9Y261 457 aaPredicted RBP2.82□□□□□ -1.96
VPS13C-203ENST00000395896 A8MXK9 166 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 HYPMO75409 117 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 S1PR2O95136 353 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 MFAP4P55083 255 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 LDLRAD3Q86YD5 345 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM18Q96B42 140 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 NCMAPQ5T1S8 102 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 Q6AWC8 147 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 JMJD8Q96S16 334 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 ATP6V0BQ99437 205 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 TRAV9-1A0A075B6T8 112 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 GALR1P47211 349 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 RAB4BP61018 213 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 CXorf66Q5JRM2 361 aaPredicted RBP2.82□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF880Q6PDB4 577 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM14EPQ6UXP3 125 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 TRBV9A0A0B4J1U6 114 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 C8orf88P0DMB2 117 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 AKR1C3P42330 323 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 RPL29P47914 159 aaKnown RBP2.82□□□□□ -1.96
VPS13C-203ENST00000395896 SAPCD1Q5SSQ6 148 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 ACSM6Q6P461 480 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 SMIM12Q96EX1 92 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF835Q9Y2P0 537 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 A8MWL6 223 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 PRTN3P24158 256 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 GNG10P50151 68 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 GNB1P62873 340 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 POU2AF1Q16633 256 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 LRRC75BQ2VPJ9 315 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 C10orf113Q5VZT2 155 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 OR5AN1Q8NGI8 311 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 FGFBP3Q8TAT2 258 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 SAMD10Q9BYL1 202 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 LRBAP50851 2863 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 HSBP1L1C9JCN9 74 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 LINC00869P0C866 280 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 FHITP49789 147 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 ZFP82Q8N141 532 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 CCL19Q99731 98 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 IGSF23A1L1A6 192 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 B4DSR2 109 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 NBR2O15453 112 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 MYOD1P15172 320 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 IFITM2Q01629 132 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 PMS2P11Q13670 270 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 ALKBH6Q3KRA9 238 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 Q6P435 159 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 OR13A1Q8NGR1 328 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 KLHDC3Q9BQ90 382 aa2.82□□□□□ -1.96
VPS13C-203ENST00000395896 IGHV3-43A0A0B4J1X8 118 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 RD3LP0DJH9 198 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 IGHV1-8P0DP01 117 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 IGHV3-43DP0DP04 118 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 RANP62826 216 aaKnown RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 AGMATQ9BSE5 352 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 A0A1B0GV50 99 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 WNT9BO14905 357 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 PPP1R17O96001 155 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 HGFACQ04756 655 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 TPRX1Q8N7U7 411 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 OR4C12Q96R67 309 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 TNFRSF19Q9NS68 423 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 OR5AC2Q9NZP5 309 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ZANQ9Y493 2812 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF205O95201 554 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 LHBP01229 141 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 PDE6HQ13956 83 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 TUSC1Q2TAM9 212 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF672Q499Z4 452 aaPredicted RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 C18orf12Q96KH6 178 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 WFIKKN1Q96NZ8 548 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 PXMP4Q9Y6I8 212 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 GUSBP1Q15486 140 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 SERTAD4Q9NUC0 356 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 A0A1B0GW64 132 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms