RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 SUMF2Q8NBJ7 301 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 OSR1Q8TAX0 266 aaPredicted RBP3.4□□□□□ -1.87
HERC4-204ENST00000395198 FXYD5Q96DB9 178 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 DPH3Q96FX2 82 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 SPTBN5Q9NRC6 3674 aaKnown RBP3.4□□□□□ -1.87
HERC4-204ENST00000395198 ANK1P16157 1881 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 CUL9Q8IWT3 2517 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 EGR2P11161 476 aaPredicted RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 NUDT2P50583 147 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 RPS13P62277 151 aaKnown RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 ZNF730Q6ZMV8 503 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 METTL27Q8N6F8 245 aaPredicted RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 OR51E1Q8TCB6 317 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 ERMAPQ96PL5 475 aaPredicted RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 OTORQ9NRC9 128 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 KCNIP1Q9NZI2 227 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 COMMD9Q9P000 198 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 NLRC5Q86WI3 1866 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 FAM72CH0Y354 149 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 SRSF10O75494 262 aaKnown RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 ARL6IP5O75915 188 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 TPPP2P59282 170 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 EIF5AP63241 154 aaKnown RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 MRPS21P82921 87 aaKnown RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 LOXL1Q08397 574 aaPredicted RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 ZNF718Q3SXZ3 478 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 FAM72AQ5TYM5 149 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 NCBP2-AS2Q69YL0 99 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 FAM72DQ6L9T8 149 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 RFLNAQ6ZTI6 216 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 FAM72BQ86X60 149 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 C3orf56Q8N813 242 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 OR5AK2Q8NH90 309 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 THTPAQ9BU02 230 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 VAMP8Q9BV40 100 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 CCDC167Q9P0B6 97 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 GPR179Q6PRD1 2367 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 RP1P56715 2156 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 KIAA1671Q9BY89 1806 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 CACNA1BQ00975 2339 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 FANCMQ8IYD8 2048 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 ATRXP46100 2492 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 OR4C45A6NMZ5 311 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 LINC01619G3V211 115 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 J3QT63 122 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 CDC42EP2O14613 210 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 LINC01565O15544 149 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 CSRP3P50461 194 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 FOXA3P55318 350 aaPredicted RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 AADACL3Q5VUY0 350 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 ZNF324BQ6AW86 544 aaPredicted RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 LCN15Q6UWW0 184 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 OR11H7Q8NGC8 314 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 RITA1Q96K30 269 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 NEUROG3Q9Y4Z2 214 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 TRBV20-1A0A075B6N2 111 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 OOSP1A8MZH6 123 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 INPP1P49441 399 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 INSL3P51460 131 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 SEC61A1P61619 476 aaKnown RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 COA6Q5JTJ3 125 aaKnown RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 EIF5AL1Q6IS14 154 aaKnown RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 FGF11Q92914 225 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 SOSTQ9BQB4 213 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 SEC61A2Q9H9S3 476 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 PNRC2Q9NPJ4 139 aaKnown RBP3.39□□□□□ -1.87
HERC4-204ENST00000395198 ZNF581Q9P0T4 197 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 CCL26Q9Y258 94 aa3.39□□□□□ -1.87
HERC4-204ENST00000395198 ARID1BQ8NFD5 2236 aaPredicted RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 IGLV1-36A0A0B4J1U3 117 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 TRDV1A0A1B0GX56 115 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 STATHP02808 62 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 RBMY1CP0DJD4 496 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 SLC25A6P12236 298 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 GP1BBP13224 206 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 PPICP45877 212 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 VDAC2P45880 294 aaPredicted RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 HINT1P49773 126 aaPredicted RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 GPM6AP51674 278 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 SUMO2P61956 95 aaKnown RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 CACNG7P62955 275 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 FOXF1Q12946 379 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 KLRD1Q13241 179 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 ZC2HC1BQ5TFG8 222 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 ATOH7Q8N100 152 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 TEX29Q8N6K0 151 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 MAPKAPK5-AS1Q8N8E1 139 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 OR2M3Q8NG83 312 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 APOBEC4Q8WW27 367 aaKnown RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 SLC25A44Q96H78 314 aaPredicted RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 MRPL32Q9BYC8 188 aaKnown RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 C21orf62Q9NYP8 219 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 TAC3Q9UHF0 121 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 AMMECR1Q9Y4X0 333 aaPredicted RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 DOCK2Q92608 1830 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 TRAV4A0A0B4J268 109 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 GABARAPH6UMI1 98 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 TRIAP1O43715 76 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 PITX3O75364 302 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms