RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 YLPM1P49750 1951 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-207ENST00000394801 TGIF2-C20orf24A0A0A6YYL0 155 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 TGOLN2O43493 480 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 PAGE4O60829 102 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 IGKV1-16P04430 117 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 DEFA4P12838 97 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 C14orf144Q96I85 54 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 PARLQ9H300 379 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 ENY2Q9NPA8 101 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 BET1LQ9NYM9 111 aa12.52□□□□□ -0.4
UBE2D3-207ENST00000394801 A0A1W2PPV4 95 aa12.52□□□□□ -0.41
UBE2D3-207ENST00000394801 PRCDQ00LT1 54 aa12.52□□□□□ -0.41
UBE2D3-207ENST00000394801 OR4F5Q8NH21 305 aa12.52□□□□□ -0.41
UBE2D3-207ENST00000394801 CCL17Q92583 94 aa12.52□□□□□ -0.41
UBE2D3-207ENST00000394801 OR4F4Q96R69 305 aa12.52□□□□□ -0.41
UBE2D3-207ENST00000394801 KCNIP2Q9NS61 270 aa12.52□□□□□ -0.41
UBE2D3-207ENST00000394801 PXMP4Q9Y6I8 212 aa12.52□□□□□ -0.41
UBE2D3-207ENST00000394801 E7EQL1 145 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 KALRNO60229 2985 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 CA2P00918 260 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 OPN1MWP04001 364 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 OPN1MW2P0DN77 364 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 OPN1MW3P0DN78 364 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 ATP5IP56385 69 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 C8orf31Q8N9H6 132 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 OSR1Q8TAX0 266 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 ZNF596Q8TC21 504 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 NEIL1Q96FI4 390 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 ZNRD1Q9P1U0 126 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 KAAG1Q9UBP8 84 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 TRBV24-1A0A075B6N3 115 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 J3QR06 171 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 TRGC2P03986 189 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 SOD3P08294 240 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 STAG3L2P0CL84 134 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 STAG3L3P0CL85 134 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 CCL3L1P16619 93 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 RPL23P62829 140 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 TEPPQ6URK8 271 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 REC114Q7Z4M0 266 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 OR5AN1Q8NGI8 311 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 RPUSD4Q96CM3 377 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 GPR61Q9BZJ8 451 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 FKBP11Q9NYL4 201 aa12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 TLN1Q9Y490 2541 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-207ENST00000394801 NDUFB3O43676 98 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 PKIAP61925 76 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 BSXQ3C1V8 233 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 MIC13Q5XKP0 118 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 NEUROG1Q92886 237 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 PATZ1Q9HBE1 687 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 C11orf94C9JXX5 98 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 PDE6DO43924 150 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 MYOD1P15172 320 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 RPL29P47914 159 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 EFNB3Q15768 340 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 LRRC10Q5BKY1 277 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 LYPD2Q6UXB3 125 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 OR5B3Q8NH48 314 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 FAM210BQ96KR6 192 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 TXNDC17Q9BRA2 123 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 MSRB2Q9Y3D2 182 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 PTPRQQ9UMZ3 2332 aa12.5□□□□□ -0.41
UBE2D3-207ENST00000394801 TEX50A0A1B0GTY4 177 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 VENTXO95231 258 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 FAM87AP0C7U9 286 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 NPPCP23582 126 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 ADIRFQ15847 76 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 TMEM177Q53S58 311 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 PLEKHA3Q9HB20 300 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 H0YJW9 148 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 APOBEC3AP31941 199 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 RAB31Q13636 194 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 GFI1BQ5VTD9 330 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 ABHD5Q8WTS1 349 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 SSX3Q99909 188 aa12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 MRPL20Q9BYC9 149 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-207ENST00000394801 TNCP24821 2201 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 A0A087X0M5 115 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 A0A1B0GX30 115 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 APOA2P02652 100 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 TRGC1P0CF51 173 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 DLX6P56179 175 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 GAMTQ14353 236 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 SPTBN4Q9H254 2564 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 TSTD3H0UI37 97 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 DVL1O14640 695 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 CXorf1O96002 111 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 PFN1P07737 140 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 LOXP28300 417 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 DDTP30046 118 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 PRR20EP86478 221 aa12.48□□□□□ -0.41
UBE2D3-207ENST00000394801 PRR20CP86479 221 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms