RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PLEKHF2Q9H8W4 249 aa5.69□□□□□ -1.5
RTN4-205ENST00000394609 ZNRD1Q9P1U0 126 aa5.69□□□□□ -1.5
RTN4-205ENST00000394609 LSM5Q9Y4Y9 91 aaKnown RBP5.69□□□□□ -1.5
RTN4-205ENST00000394609 CHD6Q8TD26 2715 aa5.69□□□□□ -1.5
RTN4-205ENST00000394609 A0A0G2JRQ6 117 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 CLEC18AA5D8T8 446 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 C17orf98A8MV24 154 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 M0R143 59 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 PROP1O75360 226 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 CLDN1O95832 211 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 IGKV1-39P01597 117 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 IGKV1D-39P04432 117 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 VDAC1P21796 283 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 GNG10P50151 68 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 BRWD1-AS2P59051 145 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 EWSR1Q01844 656 aaKnown RBP eCLIP5.68□□□□□ -1.5
RTN4-205ENST00000394609 ZNF816Q0VGE8 651 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 IQCJQ1A5X6 159 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 CT45A1Q5HYN5 189 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 CXorf66Q5JRM2 361 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 OR2C3Q8N628 320 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 CLEC18CQ8NCF0 446 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 OR2G3Q8NGZ4 309 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 OR1P1Q8NH06 330 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 CT45A3Q8NHU0 189 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 CORO2AQ92828 525 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 LIN7CQ9NUP9 197 aaKnown RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 IDI2-AS1Q9NZ38 188 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 KAAG1Q9UBP8 84 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 LINC00312Q9Y6C7 94 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 SPG11Q96JI7 2443 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 TGIF2-C20orf24A0A0A6YYL0 155 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 LOC102723971A0A1B0GUV8 181 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 MARCH11A6NNE9 402 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 LINC00473A8K010 186 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 M0R1X1 148 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 IGKV1-5P01602 117 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 AMBPP02760 352 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 ATP6V0CP27449 155 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 FAM3BP58499 235 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 ERVFC1-1P60608 527 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 PRB3Q04118 309 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 MEF2CQ06413 473 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 EIF4EBP1Q13541 118 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 USF2Q15853 346 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 ACOT6Q3I5F7 207 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 NMSQ5H8A3 153 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 NCR3LG1Q68D85 454 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 TMEM182Q6ZP80 229 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 Q6ZRM9 215 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 ZNF664Q8N3J9 261 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 ZBTB34Q8NCN2 500 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 NEU4Q8WWR8 484 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 ZNF714Q96N38 554 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 IMMP2LQ96T52 175 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 RARRES2Q99969 163 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 ABHD14AQ9BUJ0 271 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 SMIM3Q9BZL3 60 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 MAGT1Q9H0U3 335 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 IFI27L2Q9H2X8 130 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 LINC00574Q9H8X3 128 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 RAB9BQ9NP90 201 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 LYRM2Q9NU23 88 aaPredicted RBP5.68□□□□□ -1.5
RTN4-205ENST00000394609 TACC2O95359 2948 aa5.68□□□□□ -1.5
RTN4-205ENST00000394609 MALRD1Q5VYJ5 2156 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 KIR2DL5BA0A0G2JN68 375 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 KIR2DL5BA0A0G2JPC4 375 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 RNF212BA8MTL3 300 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 ZNF727A8MUV8 499 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 KRASP01116 189 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 TYMSP04818 313 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 G6PCP35575 357 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 FHITP49789 147 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 DLX1P56177 255 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 C1orf194Q5T5A4 169 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 GFI1BQ5VTD9 330 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 FAM90A2PQ658T7 463 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 ZNF841Q6ZN19 808 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 KIR2DL5AQ8N109 375 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 LYG1Q8N1E2 194 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 CYB561D1Q8N8Q1 229 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 MBD3L1Q8WWY6 194 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 IL22RA2Q969J5 263 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 TMEM18Q96B42 140 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 GPR146Q96CH1 333 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 PARD6GQ9BYG4 376 aaPredicted RBP5.67□□□□□ -1.5
RTN4-205ENST00000394609 SH3BGRL3Q9H299 93 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 GAL3ST2Q9H3Q3 398 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 SDF2L1Q9HCN8 221 aa5.67□□□□□ -1.5
RTN4-205ENST00000394609 RPUSD1Q9UJJ7 312 aaKnown RBP5.67□□□□□ -1.5
RTN4-205ENST00000394609 RCL1Q9Y2P8 373 aaKnown RBP5.67□□□□□ -1.5
RTN4-205ENST00000394609 RAI1Q7Z5J4 1906 aaPredicted RBP5.67□□□□□ -1.5
RTN4-205ENST00000394609 ASH1LQ9NR48 2969 aaKnown RBP5.67□□□□□ -1.5
RTN4-205ENST00000394609 SAA2-SAA4A0A096LPE2 208 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 FCGR3BO75015 233 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 S1PR2O95136 353 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 SAA2P0DJI9 122 aaPredicted RBP5.66□□□□□ -1.5
RTN4-205ENST00000394609 SLC25A6P12236 298 aa5.66□□□□□ -1.5
RTN4-205ENST00000394609 DUTP33316 252 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms