RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 SLC25A4P12235 298 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 DLX1P56177 255 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 FOXL1Q12952 345 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 MORN2Q502X0 79 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 PRSS54Q6PEW0 395 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 FAM159AQ6UWV7 190 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 ZNF645Q8N7E2 425 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 LRTM2Q8N967 370 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 RBPMSQ93062 196 aaKnown RBP4.79□□□□□ -1.64
CASC3-202ENST00000394114 TMEM56Q96MV1 263 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 AGMATQ9BSE5 352 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 C2orf88Q9BSF0 95 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 ZNF471Q9BX82 626 aaPredicted RBP4.79□□□□□ -1.64
CASC3-202ENST00000394114 SMIM3Q9BZL3 60 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 TMED3Q9Y3Q3 217 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 TMEM56-RWDD3S4R434 201 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 KBTBD11-OT1A0A1B0GTJ5 212 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 C17orf98A8MV24 154 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 NDUFB3O43676 98 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 CLDN1O95832 211 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 KRASP01116 189 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 FCGR2BP31994 310 aaPredicted RBP4.79□□□□□ -1.64
CASC3-202ENST00000394114 LPAR6P43657 344 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 PAX5Q02548 391 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 ZNF585BQ52M93 769 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 RBMS3Q6XE24 437 aaKnown RBP4.79□□□□□ -1.64
CASC3-202ENST00000394114 SIGLEC15Q6ZMC9 328 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 ACOT7LQ6ZUV0 252 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 ZNF430Q9H8G1 570 aaPredicted RBP4.79□□□□□ -1.64
CASC3-202ENST00000394114 PLEKHF2Q9H8W4 249 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 CBLN4Q9NTU7 201 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 CLN8Q9UBY8 286 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 NAGKQ9UJ70 344 aa4.79□□□□□ -1.64
CASC3-202ENST00000394114 ANKRD17O75179 2603 aaKnown RBP4.79□□□□□ -1.64
CASC3-202ENST00000394114 KANTRA0A1W2PQU2 76 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 hADV38S2A0JD32 116 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 K7EPK0 472 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 PPIHO43447 177 aaKnown RBP4.78□□□□□ -1.64
CASC3-202ENST00000394114 SSSCA1O60232 199 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 SOX15O60248 233 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 PROP1O75360 226 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 RLN2P04090 185 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 CGB3P0DN86 165 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 CGB7P0DN87 165 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 VDAC1P21796 283 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 SRPXP78539 464 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 MRPS11P82912 194 aaKnown RBP4.78□□□□□ -1.64
CASC3-202ENST00000394114 LRRC10Q5BKY1 277 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 Q6ZRM9 215 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 SPAG16Q8N0X2 631 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 LYG1Q8N1E2 194 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 KCNRGQ8N5I3 272 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 FAM71E2Q8N5Q1 922 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 ZNF503Q96F45 646 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 AKR1E2Q96JD6 320 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 RAB1BQ9H0U4 201 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 JPT1Q9UK76 154 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 RCL1Q9Y2P8 373 aaKnown RBP4.78□□□□□ -1.64
CASC3-202ENST00000394114 PLXNB1O43157 2135 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 TLN2Q9Y4G6 2542 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 A0A0D9SG52 128 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 H3BP45 60 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 M0R1X1 148 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 RRHO14718 337 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 DEDDO75618 318 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 OR2F2O95006 317 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 S1PR2O95136 353 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 IGKV1-5P01602 117 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 PET100P0DJ07 73 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 C4BPBP20851 252 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 G6PCP35575 357 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 NKX2-1P43699 371 aaPredicted RBP4.78□□□□□ -1.64
CASC3-202ENST00000394114 BRWD1-AS2P59051 145 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 TNFRSF9Q07011 255 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 OR2F1Q13607 317 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 NMSQ5H8A3 153 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 CT45A1Q5HYN5 189 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 FAM74A1Q5RGS3 127 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 ZNF767PQ75MW2 155 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 ERASQ7Z444 233 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 CT45A3Q8NHU0 189 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 SFT2D1Q8WV19 159 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 GPR146Q96CH1 333 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 IFI27L2Q9H2X8 130 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 SEBOXQ9HB31 216 aaPredicted RBP4.78□□□□□ -1.64
CASC3-202ENST00000394114 CACNG5Q9UF02 275 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 ZANQ9Y493 2812 aa4.78□□□□□ -1.64
CASC3-202ENST00000394114 TMEM89A2RUT3 159 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 BCL2L11O43521 198 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 YPEL1O60688 119 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 IFNA7P01567 189 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 DAOP14920 347 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 RPL12P30050 165 aaKnown RBP4.77□□□□□ -1.65
CASC3-202ENST00000394114 PPOXP50336 477 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 HERV-K104P63124 156 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 GAGE2BQ13066 116 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 GAGE2EQ4V326 116 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 C11orf71Q6IPW1 123 aa4.77□□□□□ -1.65
CASC3-202ENST00000394114 GAGE2AQ6NT46 116 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms