RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SLC5A7Q9GZV3 580 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 TRAV18A0A075B6X5 111 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 KIR2DL5BA0A0G2JN68 375 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 KIR2DL5BA0A0G2JPC4 375 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 NUPR2A6NF83 97 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 TGOLN2O43493 480 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 BMI1P35226 326 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 KCTD21Q4G0X4 260 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 SPSB3Q6PJ21 355 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 KIR2DL5AQ8N109 375 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 OR5AP2Q8NGF4 316 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 KIR2DL5BQ8NHK3 375 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 BSCL2Q96G97 398 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 DAZ1Q9NQZ3 744 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 TMEM140Q9NV12 185 aa13.02□□□□□ -0.33
SNRPA1-202ENST00000394082 SERPINE2P07093 398 aa13.01□□□□□ -0.33
SNRPA1-202ENST00000394082 ZNF818PQ6ZRF7 136 aa13.01□□□□□ -0.33
SNRPA1-202ENST00000394082 AUNIPQ9H7T9 357 aa13.01□□□□□ -0.33
SNRPA1-202ENST00000394082 DIABLOQ9NR28 239 aa13.01□□□□□ -0.33
SNRPA1-202ENST00000394082 TRAV3A0A0B4J244 114 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 K7EMT4 169 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 PTHLHP12272 177 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 LAMTOR1Q6IAA8 161 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 DHRS11Q6UWP2 260 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 DMBX1Q8NFW5 382 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 OR1L8Q8NGR8 309 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 OR5H6Q8NGV6 325 aa13□□□□□ -0.33
SNRPA1-202ENST00000394082 NDUFA4O00483 81 aa12.99□□□□□ -0.33
SNRPA1-202ENST00000394082 SPRY2O43597 315 aa12.99□□□□□ -0.33
SNRPA1-202ENST00000394082 GNRHRP30968 328 aa12.99□□□□□ -0.33
SNRPA1-202ENST00000394082 WT1-ASQ06250 92 aa12.99□□□□□ -0.33
SNRPA1-202ENST00000394082 OR10W1Q8NGF6 305 aa12.99□□□□□ -0.33
SNRPA1-202ENST00000394082 NDUFA4L2Q9NRX3 87 aa12.99□□□□□ -0.33
SNRPA1-202ENST00000394082 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
SNRPA1-202ENST00000394082 TEX50A0A1B0GTY4 177 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 MARCH11A6NNE9 402 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 S1PR2O95136 353 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 OR13C7P0DN81 318 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 F2RP25116 425 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 FXYD4P59646 89 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 ERVK-16P61578 105 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 NEDD8Q15843 81 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 IDNKQ5T6J7 187 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 AADACL3Q5VUY0 350 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 OR51H1Q8NH63 302 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 LSM10Q969L4 123 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 VCX3AQ9NNX9 186 aa12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 F11RQ9Y624 299 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-202ENST00000394082 IGHV3-35A0A0C4DH35 117 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 A0A0J9YWU9 116 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 CXorf65A6NEN9 183 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 OR4C46A6NHA9 309 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 C15orf62A8K5M9 175 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 XRCC3O43542 346 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 TNFAIP8O95379 198 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 HERV-K104P61576 105 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 MXD1Q05195 221 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 SLC25A24Q6NUK1 477 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 LYG2Q86SG7 212 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 TMEM217Q8N7C4 229 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 STPG3Q8N7X2 389 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 RNF183Q96D59 192 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 C21orf62Q9NYP8 219 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 ANAPC10Q9UM13 185 aa12.97□□□□□ -0.33
SNRPA1-202ENST00000394082 OR2T8A6NH00 312 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 F8W735 103 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 PGLYRP1O75594 196 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 CLEC2LP0C7M8 214 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 ODF3L2Q3SX64 289 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 TMEM17Q86X19 198 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 CROCCP3Q8IVE0 287 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 OR5B3Q8NH48 314 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 SCARB1Q8WTV0 552 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 MOB3AQ96BX8 217 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 GALNT14Q96FL9 552 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 FAM212BQ9NTI7 297 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 FKBP11Q9NYL4 201 aa12.96□□□□□ -0.33
SNRPA1-202ENST00000394082 A0A087WXM4 84 aa12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 LY6G6CO95867 125 aa12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 FCGR2BP31994 310 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 MFAP2P55001 183 aa12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 CMC4P56277 68 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 CMTM1Q8IZ96 169 aa12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 DGCR14Q96DF8 476 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 S100A16Q96FQ6 103 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 TMEM56Q96MV1 263 aa12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 EHFQ9NZC4 300 aa12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 KLK5Q9Y337 293 aaPredicted RBP12.95□□□□□ -0.34
SNRPA1-202ENST00000394082 FRAS1Q86XX4 4008 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 K7EIM0 57 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 SNAPC5O75971 98 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 NAT1P18440 290 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 ADMP35318 185 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 EWSR1Q01844 656 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 DEFB135Q30KP9 77 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 TSPAN14Q8NG11 270 aa12.94□□□□□ -0.34
SNRPA1-202ENST00000394082 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms