RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CD300LFQ8TDQ1 290 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 CHRDL1Q9BU40 450 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 CCDC90BQ9GZT6 254 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 CCL28Q9NRJ3 127 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 THYN1Q9P016 225 aa11.29□□□□□ -0.6
CHMP3-202ENST00000393773 DNAH11Q96DT5 4516 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 IGHV3OR16-8A0A075B7F1 116 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 SMIM30A4D0T7 59 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 UPK2O00526 184 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 CTSDP07339 412 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-202ENST00000393773 MFAP2P55001 183 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 AQP4P55087 323 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 WT1-ASQ06250 92 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 ZNF773Q6PK81 442 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 ZNF367Q7RTV3 350 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 OR13F1Q8NGS4 319 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 SECTM1Q8WVN6 248 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 QTRT1Q9BXR0 403 aaKnown RBP11.28□□□□□ -0.6
CHMP3-202ENST00000393773 TMEM140Q9NV12 185 aa11.28□□□□□ -0.6
CHMP3-202ENST00000393773 ADMP35318 185 aa11.27□□□□□ -0.61
CHMP3-202ENST00000393773 GNG2P59768 71 aa11.27□□□□□ -0.61
CHMP3-202ENST00000393773 RBMS2Q15434 407 aaKnown RBP11.27□□□□□ -0.61
CHMP3-202ENST00000393773 SPSB3Q6PJ21 355 aa11.27□□□□□ -0.61
CHMP3-202ENST00000393773 ATP6V0BQ99437 205 aa11.27□□□□□ -0.61
CHMP3-202ENST00000393773 AIFM2Q9BRQ8 373 aa11.27□□□□□ -0.61
CHMP3-202ENST00000393773 COMMD5Q9GZQ3 224 aa11.27□□□□□ -0.61
CHMP3-202ENST00000393773 MFFQ9GZY8 342 aa11.27□□□□□ -0.61
CHMP3-202ENST00000393773 TRDV1A0A1B0GX56 115 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 K7EMT4 169 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 SULT1C2O00338 296 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 ZNF207O43670 478 aaKnown RBP11.26□□□□□ -0.61
CHMP3-202ENST00000393773 PPYP01298 95 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 SERPINE2P07093 398 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 PTHLHP12272 177 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 NQO2P16083 231 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 THOC7Q6I9Y2 204 aaKnown RBP11.26□□□□□ -0.61
CHMP3-202ENST00000393773 C22orf42Q6IC83 251 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 C11orf45Q8TAV5 145 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 RARRES2Q99969 163 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 C20orf24Q9BUV8 137 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 CSTL1Q9H114 145 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 FBXL17Q9UF56 701 aa11.26□□□□□ -0.61
CHMP3-202ENST00000393773 IGHV3-21A0A0B4J1V1 117 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 C15orf62A8K5M9 175 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 MPTX1A8MV57 137 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 K7EIM0 57 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 HPRT1P00492 218 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 FCGR2CP31995 323 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 CATR1Q13166 79 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 ZBTB34Q8NCN2 500 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 SCARB1Q8WTV0 552 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 RNF2Q99496 336 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 C6orf62Q9GZU0 229 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-202ENST00000393773 C21orf62Q9NYP8 219 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 ETV7Q9Y603 341 aa11.25□□□□□ -0.61
CHMP3-202ENST00000393773 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
CHMP3-202ENST00000393773 CYB5BO43169 146 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 SCGNO76038 276 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 TRAPPC2P0DI81 140 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 TRAPPC2BP0DI82 140 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 OR13C7P0DN81 318 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 TCTAP57738 103 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 ARPC4P59998 168 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 ZNF818PQ6ZRF7 136 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 HSD17B13Q7Z5P4 300 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-202ENST00000393773 GVQW1Q8N7I0 195 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 BEST4Q8NFU0 473 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 OR11H2Q8NH07 326 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 OR51H1Q8NH63 302 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 LGALS14Q8TCE9 139 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 C2CD4CQ8TF44 421 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 NRG4Q8WWG1 115 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 PLEKHA2Q9HB19 425 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 COMMD9Q9P000 198 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 SMPXQ9UHP9 88 aa11.24□□□□□ -0.61
CHMP3-202ENST00000393773 AGRNO00468 2067 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 TEX50A0A1B0GTY4 177 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 NOTOA8MTQ0 251 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 CHEK1O14757 476 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 IFNA4P05014 189 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 SLC25A24Q6NUK1 477 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 DMBX1Q8NFW5 382 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 LSM10Q969L4 123 aaKnown RBP11.23□□□□□ -0.61
CHMP3-202ENST00000393773 SLC5A7Q9GZV3 580 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 NDUFA4L2Q9NRX3 87 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
CHMP3-202ENST00000393773 MARCH11A6NNE9 402 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 DEFB4AO15263 64 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 CTSGP08311 255 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 FXYD4P59646 89 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 HOGA1Q86XE5 327 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 OR1L8Q8NGR8 309 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 OR10C1Q96KK4 312 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 MUC4Q99102 2169 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 RHPN1-AS1Q9BWJ2 59 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
CHMP3-202ENST00000393773 A0A1B0GVY2 172 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 CA1P00915 261 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms