RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 GAGE2AQ6NT46 116 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 MOB3CQ70IA8 216 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 CALHM3Q86XJ0 350 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 NMNAT2Q9BZQ4 307 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 SMDT1Q9H4I9 107 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 LRP12Q9Y561 859 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 TSPAN13O95857 204 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 PLAUP00749 431 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 IL5P05113 134 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 TAS2R46P59540 309 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 HERV-K104P61576 105 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF660Q6AZW8 331 aaPredicted RBP6.8□□□□□ -1.32
LIMS1-203ENST00000393310 MORN3Q6PF18 240 aaPredicted RBP6.8□□□□□ -1.32
LIMS1-203ENST00000393310 OR11H7Q8NGC8 314 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 SLC25A21Q9BQT8 299 aaPredicted RBP6.8□□□□□ -1.32
LIMS1-203ENST00000393310 TAS2R5Q9NYW4 299 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 TMEM233B4DJY2 109 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 FCGR2BP31994 310 aaPredicted RBP6.8□□□□□ -1.32
LIMS1-203ENST00000393310 DLEU7Q6UYE1 221 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 FBXW12Q6X9E4 464 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 THEM6Q8WUY1 208 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 JPT1Q9UK76 154 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 FUT9Q9Y231 359 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 SVEP1Q4LDE5 3571 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 A0A1W2PPE3 182 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 C5orf63A6NC05 138 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 NCBP2LA6PVI3 153 aaKnown RBP6.79□□□□□ -1.32
LIMS1-203ENST00000393310 M0QYG6 137 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 LY6EQ16553 131 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 SPANXN4Q5MJ08 99 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 C9orf66Q5T8R8 295 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 ADAMTSL5Q6ZMM2 481 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 WDR31Q8NA23 367 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 OR10G2Q8NGC3 310 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 GPR148Q8TDV2 347 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 ITLN1Q8WWA0 313 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 RTN4IP1Q8WWV3 396 aaPredicted RBP6.79□□□□□ -1.32
LIMS1-203ENST00000393310 SLC25A46Q96AG3 418 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 MYLKQ15746 1914 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 IFITM10A6NMD0 228 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 H3BUT2 72 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 PLPP2O43688 288 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 GAS1P54826 345 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 PSG4Q00888 419 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 TAL2Q16559 108 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 MPV17LQ2QL34 196 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 OR2T10Q8NGZ9 312 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 SMIM19Q96E16 107 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 WDR61Q9GZS3 305 aaKnown RBP6.79□□□□□ -1.32
LIMS1-203ENST00000393310 KCNE5Q9UJ90 142 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 PTPRBP23467 1997 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 IGHV4-61A0A0C4DH41 118 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BKO60814 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 UPK3AO75631 287 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BJP06899 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 PAX1P15863 534 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 CXCL3P19876 107 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BOP23527 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 ATP6V0CP27449 155 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BBP33778 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BDP58876 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BCP62807 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 PSG6Q00889 435 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 IL13RA2Q14627 380 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST2H2BEQ16778 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 SLC25A53Q5H9E4 307 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.79□□□□□ -1.32
LIMS1-203ENST00000393310 TMEM136Q6ZRR5 245 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 KIR3DL3Q8N743 410 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BHQ93079 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 RNF183Q96D59 192 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 SEC22AQ96IW7 307 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BNQ99877 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 HIST1H2BMQ99879 126 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 GPR132Q9UNW8 380 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 COA3Q9Y2R0 106 aaPredicted RBP6.79□□□□□ -1.32
LIMS1-203ENST00000393310 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
LIMS1-203ENST00000393310 DSPPQ9NZW4 1301 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 ROS1P08922 2347 aa6.79□□□□□ -1.32
LIMS1-203ENST00000393310 DENND4CQ5VZ89 1909 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 PRSS37A4D1T9 235 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF736B4DX44 427 aaPredicted RBP6.78□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF593O00488 134 aaPredicted RBP6.78□□□□□ -1.32
LIMS1-203ENST00000393310 SH2D1BO14796 132 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 APOMO95445 188 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 POLR2IP36954 125 aaKnown RBP6.78□□□□□ -1.32
LIMS1-203ENST00000393310 GALR1P47211 349 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 FGF12P61328 243 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 SEC11AP67812 179 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 PIPOXQ9P0Z9 390 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 GNG12Q9UBI6 72 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 CHD9Q3L8U1 2897 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 IGHV3OR16-10A0A075B7F0 116 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 RAMP1O60894 148 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF32P17041 273 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 TEX38Q6PEX7 206 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 LCN15Q6UWW0 184 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 TMEM52Q8NDY8 209 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 OR10S1Q8NGN2 331 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms