RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 MECP2P51608 486 aaKnown RBP9.44□□□□□ -0.9
CTSC-202ENST00000393301 PIGPP57054 158 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 DHODHQ02127 395 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 KLF5Q13887 457 aaPredicted RBP9.44□□□□□ -0.9
CTSC-202ENST00000393301 FXYD3Q14802 87 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 TMEM128Q5BJH2 165 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 IL34Q6ZMJ4 242 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 HSD17B13Q7Z5P4 300 aaPredicted RBP9.44□□□□□ -0.9
CTSC-202ENST00000393301 TBC1D26Q86UD7 250 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 FAM219AQ8IW50 185 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 MARCH1Q8TCQ1 289 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 CASTOR1Q8WTX7 329 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 TMEM56Q96MV1 263 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 OR2A7Q96R45 310 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 TSC22D3Q99576 134 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 ELOVL1Q9BW60 279 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 TMEM222Q9H0R3 208 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 COPZ2Q9P299 210 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 TMEM56-RWDD3S4R434 201 aa9.44□□□□□ -0.9
CTSC-202ENST00000393301 MARCH11A6NNE9 402 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 SLC25A17O43808 307 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 NDUFB6O95139 128 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 IGHV3-11P01762 117 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 RLN1P04808 185 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 P0C879 139 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 SAA1P0DJI8 122 aaPredicted RBP9.43□□□□□ -0.9
CTSC-202ENST00000393301 ZNF343Q6P1L6 599 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 LRTM2Q8N967 370 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 ABHD5Q8WTS1 349 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 SEC22AQ96IW7 307 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 USMG5Q96IX5 58 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 ZMAT4Q9H898 229 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
CTSC-202ENST00000393301 C14orf166Q9Y224 244 aaKnown RBP9.43□□□□□ -0.9
CTSC-202ENST00000393301 C3orf85A0A1B0GTC6 90 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 DUXBA0A1W2PPF3 345 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 INS-IGF2F8WCM5 200 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 PLA2G10O15496 165 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 IGHV4-30-4P0DP06 118 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 BTCP35070 178 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 SRPXP78539 464 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 ASAH1Q13510 395 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 SCGB2B2Q4G0G5 96 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 RNASE12Q5GAN4 147 aaKnown RBP9.42□□□□□ -0.9
CTSC-202ENST00000393301 OR4A47Q6IF82 309 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 OR9G4Q8NGQ1 327 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 OR51H1Q8NH63 302 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 GLYATL2Q8WU03 294 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 MS4A10Q96PG2 267 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 CLCC1Q96S66 551 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 SPIN2AQ99865 258 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 SPIN2BQ9BPZ2 258 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 NAA60Q9H7X0 242 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 FKBP11Q9NYL4 201 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 KCNIP3Q9Y2W7 256 aa9.42□□□□□ -0.9
CTSC-202ENST00000393301 EPPK1P58107 5090 aaKnown RBP9.42□□□□□ -0.9
CTSC-202ENST00000393301 TEX13DA0A0J9YY54 714 aaPredicted RBP9.41□□□□□ -0.9
CTSC-202ENST00000393301 C13orf42A0A1B0GVH6 325 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 UPK2O00526 184 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 TNFSF12O43508 249 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 UPK1BO75841 260 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 SERPINE2P07093 398 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 PGAM2P15259 253 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 INPP1P49441 399 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 RPL8P62917 257 aaKnown RBP9.41□□□□□ -0.9
CTSC-202ENST00000393301 PJVKQ0ZLH3 352 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 FAAP20Q6NZ36 180 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 SLC25A42Q86VD7 318 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 OR2K2Q8NGT1 345 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 OR5B3Q8NH48 314 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 GRPEL2Q8TAA5 225 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 LSM10Q969L4 123 aaKnown RBP9.41□□□□□ -0.9
CTSC-202ENST00000393301 TMEM230Q96A57 120 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 ZNF430Q9H8G1 570 aaPredicted RBP9.41□□□□□ -0.9
CTSC-202ENST00000393301 TMEM14BQ9NUH8 114 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 MCUBQ9NWR8 336 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 COA4Q9NYJ1 87 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 BIRC6Q9NR09 4857 aa9.41□□□□□ -0.9
CTSC-202ENST00000393301 TRBV9A0A0B4J1U6 114 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 J3QRK9 145 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 LYRM1O43325 122 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 S1PR2O95136 353 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 IGKV1-39P01597 117 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 IGKV1D-39P04432 117 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 SLC25A6P12236 298 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 LPAR6P43657 344 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 ERVK-16P61578 105 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 SUPT4H1P63272 117 aaKnown RBP9.4□□□□□ -0.9
CTSC-202ENST00000393301 PHLDA2Q53GA4 152 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 FAM209BQ5JX69 171 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 ZNF57Q68EA5 555 aaPredicted RBP9.4□□□□□ -0.9
CTSC-202ENST00000393301 SGPP2Q8IWX5 399 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 ADAD2Q8NCV1 583 aaKnown RBP9.4□□□□□ -0.9
CTSC-202ENST00000393301 TP53RKQ96S44 253 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 PALMDQ9NP74 551 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 PEF1Q9UBV8 284 aaKnown RBP9.4□□□□□ -0.9
CTSC-202ENST00000393301 PRNDQ9UKY0 176 aa9.4□□□□□ -0.9
CTSC-202ENST00000393301 HYDINQ4G0P3 5121 aa9.39□□□□□ -0.91
CTSC-202ENST00000393301 NPIPB5A8MRT5 1133 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms