RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 C19orf54Q5BKX5 351 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 FADS6Q8N9I5 356 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 RAXQ9Y2V3 346 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 TRBV20OR9-2A0A075B6H5 130 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 TRBV6-7A0A0A0MS04 114 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 IGHV1-69-2A0A0G2JMI3 117 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 NPPCP23582 126 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 PSG7Q13046 419 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 TIMM23BQ5SRD1 257 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 FAM89BQ8N5H3 189 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.07□□□□□ -0.64
LCA5-202ENST00000392959 DDB2Q92466 427 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 CACNA1HO95180 2353 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 PAQR4Q8N4S7 273 aaPredicted RBP11.07□□□□□ -0.64
LCA5-202ENST00000392959 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 OR11H2Q8NH07 326 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
LCA5-202ENST00000392959 IGKV3D-15A0A087WSY6 115 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 IGKV1D-13A0A0B4J2D9 117 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 PEX7O00628 323 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 IGKV3-15P01624 115 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 GPX1P07203 203 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 IGKV1-13P0DP09 117 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 IMMP1LQ96LU5 166 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 TRAV9-1A0A075B6T8 112 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 ACSF3Q4G176 576 aaPredicted RBP11.07□□□□□ -0.64
LCA5-202ENST00000392959 GPR82Q96P67 336 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 GFI1Q99684 422 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 DCTN5Q9BTE1 182 aa11.07□□□□□ -0.64
LCA5-202ENST00000392959 NOTCH3Q9UM47 2321 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 LGALS3P17931 250 aaKnown RBP11.06□□□□□ -0.64
LCA5-202ENST00000392959 C18orf12Q96KH6 178 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 A0A1B0GUT8 65 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 FOXI3A8MTJ6 420 aaPredicted RBP11.06□□□□□ -0.64
LCA5-202ENST00000392959 MPZP25189 248 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 DLX6P56179 175 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 FAM106AQ4KMX7 169 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 AMMECR1LQ6DCA0 310 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 WBP1Q96G27 269 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 PRDM13Q9H4Q3 707 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 ID3Q02535 119 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 CACNG8Q8WXS5 425 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 KIR2DL4Q99706 377 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 LOC105371242A0A075B767 164 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 CCL1P22362 96 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 TAS2R60P59551 318 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 LRTM2Q8N967 370 aa11.06□□□□□ -0.64
LCA5-202ENST00000392959 FAM216BQ8N7L0 139 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 ST6GALNAC3Q8NDV1 305 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 FDCSPQ8NFU4 85 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 KBTBD11-OT1A0A1B0GTJ5 212 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 SFTPCP11686 197 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 FAM201AQ5SY85 155 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 OR52E5Q8NH55 327 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 FAM131CQ96AQ9 280 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 ZNF319Q9P2F9 582 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 ARID2Q68CP9 1835 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 TRAV8-6A0A0B4J262 113 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 TM4SF5O14894 197 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 IGLV3-19P01714 112 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 MIR17HGQ75NE6 70 aa11.05□□□□□ -0.64
LCA5-202ENST00000392959 GREB1LQ9C091 1923 aaPredicted RBP11.05□□□□□ -0.64
LCA5-202ENST00000392959 MTCL1Q9Y4B5 1905 aaKnown RBP11.05□□□□□ -0.64
LCA5-202ENST00000392959 RGPD3A6NKT7 1758 aaPredicted RBP11.05□□□□□ -0.64
LCA5-202ENST00000392959 IGLV3-12A0A075B6K2 115 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 IGHV3OR16-13A0A075B7E8 117 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 IGHV3-74A0A0B4J1X5 117 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 JOSD1Q15040 202 aaPredicted RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 PRSS8Q16651 343 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 FAM19A2Q8N3H0 131 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 PLPPR1Q8TBJ4 325 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 C18orf15Q96N68 181 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 A0A0G2JMM0 328 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 A0A1W2PPB8 328 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 A0A1W2PRS3 328 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 KIR3DP1A8MWS1 328 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 ATP5G2Q06055 141 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 MRPL14Q6P1L8 145 aaKnown RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 FBXL15Q9H469 300 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 TRAV24A0A0B4J272 114 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 B9A039 149 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 GATA2P23769 480 aaPredicted RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 ZNF324BQ6AW86 544 aaPredicted RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 GTF3AQ92664 365 aaKnown RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 COLQQ9Y215 455 aaPredicted RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 ATRXP46100 2492 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 HIST1H1AQ02539 215 aaPredicted RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 DMRTA1Q5VZB9 504 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 C1orf162Q8NEQ5 155 aaPredicted RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 TMEM106BQ9NUM4 274 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 TMEM160Q9NX00 188 aa11.04□□□□□ -0.64
LCA5-202ENST00000392959 SOX21Q9Y651 276 aaPredicted RBP11.04□□□□□ -0.64
LCA5-202ENST00000392959 SERF1AO75920 110 aa11.03□□□□□ -0.64
LCA5-202ENST00000392959 SMIM13P0DJ93 91 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms