RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 WDR61Q9GZS3 305 aaKnown RBP13.72□□□□□ -0.21
SNX9-201ENST00000392185 KIAA1549LQ6ZVL6 1849 aa13.71□□□□□ -0.21
SNX9-201ENST00000392185 IGHV3OR16-13A0A075B7E8 117 aa13.71□□□□□ -0.21
SNX9-201ENST00000392185 IGHV3-74A0A0B4J1X5 117 aa13.71□□□□□ -0.21
SNX9-201ENST00000392185 GATA2P23769 480 aaPredicted RBP13.71□□□□□ -0.21
SNX9-201ENST00000392185 WFDC3Q8IUB2 231 aa13.71□□□□□ -0.21
SNX9-201ENST00000392185 SGK494Q96LW2 274 aa13.71□□□□□ -0.21
SNX9-201ENST00000392185 E7EQL1 145 aa13.71□□□□□ -0.21
SNX9-201ENST00000392185 TMEM178BH3BS89 294 aa13.71□□□□□ -0.21
SNX9-201ENST00000392185 PCSK4Q6UW60 755 aa13.71□□□□□ -0.21
SNX9-201ENST00000392185 ZNF430Q9H8G1 570 aaPredicted RBP13.71□□□□□ -0.21
SNX9-201ENST00000392185 SAA1P0DJI8 122 aaPredicted RBP13.71□□□□□ -0.22
SNX9-201ENST00000392185 TFF3Q07654 80 aa13.71□□□□□ -0.22
SNX9-201ENST00000392185 PNRC1Q12796 327 aaPredicted RBP13.71□□□□□ -0.22
SNX9-201ENST00000392185 ST6GALNAC3Q8NDV1 305 aa13.71□□□□□ -0.22
SNX9-201ENST00000392185 RPUSD1Q9UJJ7 312 aaKnown RBP13.71□□□□□ -0.22
SNX9-201ENST00000392185 LAMA2P24043 3122 aaKnown RBP13.7□□□□□ -0.22
SNX9-201ENST00000392185 IGHV3OR16-8A0A075B7F1 116 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 HERPUD1Q15011 391 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 FAM53AQ6NSI3 398 aaPredicted RBP13.7□□□□□ -0.22
SNX9-201ENST00000392185 OR4A5Q8NH83 315 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 TMEM133Q9H2Q1 129 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 NAGKQ9UJ70 344 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 XKRY2A2RUG3 117 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 HSBP1L1C9JCN9 74 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 RD3LP0DJH9 198 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 RCC1LQ96I51 464 aaKnown RBP13.7□□□□□ -0.22
SNX9-201ENST00000392185 HIGD1AQ9Y241 93 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 TRAPPC1Q9Y5R8 145 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 DNASE2O00115 360 aaPredicted RBP13.7□□□□□ -0.22
SNX9-201ENST00000392185 SMAD7O15105 426 aaKnown RBP13.7□□□□□ -0.22
SNX9-201ENST00000392185 CEACAM8P31997 349 aaPredicted RBP13.7□□□□□ -0.22
SNX9-201ENST00000392185 SNRPEP62304 92 aaKnown RBP13.7□□□□□ -0.22
SNX9-201ENST00000392185 SELENOTP62341 195 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 ID3Q02535 119 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
SNX9-201ENST00000392185 MFSD2BA6NFX1 497 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 KIAA1324LA8MWY0 1029 aaPredicted RBP13.69□□□□□ -0.22
SNX9-201ENST00000392185 TGFAP01135 160 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 OR2T10Q8NGZ9 312 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 NABP2Q9BQ15 211 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 RRHO14718 337 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 FABP4P15090 132 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 LYPD2Q6UXB3 125 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 ASCL4Q6XD76 172 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 WDR86Q86TI4 376 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 RNF166Q96A37 237 aaPredicted RBP13.69□□□□□ -0.22
SNX9-201ENST00000392185 GRAMD2BQ96HH9 432 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 RABAC1Q9UI14 185 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 RNF24Q9Y225 148 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 FAM74A7A6NL05 159 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 FAM74A3Q4VXF1 159 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 C10orf55Q5SWW7 151 aa13.69□□□□□ -0.22
SNX9-201ENST00000392185 TMSB15BA0A087X1C1 80 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 ARL14EPLP0DKL9 152 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 STPG3Q8N7X2 389 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.68□□□□□ -0.22
SNX9-201ENST00000392185 EML6Q6ZMW3 1958 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 FCN1O00602 326 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 COL8A2P25067 703 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 FCGR2BP31994 310 aaPredicted RBP13.68□□□□□ -0.22
SNX9-201ENST00000392185 LOXL3P58215 753 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 CORTO00230 105 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 SLC31A2O15432 143 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 OR9G9P0C7N8 305 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 SLC35B1P78383 322 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 MRPL54Q6P161 138 aaKnown RBP13.68□□□□□ -0.22
SNX9-201ENST00000392185 STXBP6Q8NFX7 210 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 CYYR1Q96J86 154 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 DNAJC4Q9NNZ3 241 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 IGKV1-6A0A0C4DH72 117 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 IGHV3-23P01764 117 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 IGFBP2P18065 325 aa13.68□□□□□ -0.22
SNX9-201ENST00000392185 COL8A1P27658 744 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 TMEM200BQ69YZ2 307 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 HIVEP3Q5T1R4 2406 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 PGPA6NDG6 321 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 HLA-DRB5Q30154 266 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 OR5R1Q8NH85 324 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 ZNRD1Q9P1U0 126 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 IGHV3-49A0A0A0MS15 119 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 PDE6DO43924 150 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 OR2J3O76001 311 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 NCMAPQ5T1S8 102 aa13.67□□□□□ -0.22
SNX9-201ENST00000392185 NPIPB11E5RHQ5 1161 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 TFPI2P48307 235 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 ZNF525Q8N782 197 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 NPCDR1Q9BY65 106 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 TMEM131Q92545 1883 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 DPPA3Q6W0C5 159 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 PQLC2Q6ZP29 291 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 SRD5A3Q9H8P0 318 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 TSTD3H0UI37 97 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 HSBP1O75506 76 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 HEPN1Q6WQI6 88 aa13.66□□□□□ -0.22
SNX9-201ENST00000392185 IGKV1-5P01602 117 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 SCGB2A2Q13296 93 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 DUX4L9Q6RFH8 374 aaPredicted RBP13.65□□□□□ -0.22
SNX9-201ENST00000392185 USP9YO00507 2555 aaPredicted RBP13.65□□□□□ -0.22
SNX9-201ENST00000392185 WIPF3A6NGB9 483 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms