RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 OR1L8Q8NGR8 309 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 LINC00052Q96N35 136 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 RNF5Q99942 180 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 HINT2Q9BX68 163 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 FBXO7Q9Y3I1 522 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 VWC2LB2RUY7 222 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 SLC25A17O43808 307 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 TSPAN15O95858 294 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 PAX1P15863 534 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 HOXB4P17483 251 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 ATP5J2P56134 94 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 SP5Q6BEB4 398 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 ZNF430Q9H8G1 570 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 RNASEK-C17orf49H0YIS7 233 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 OPN1MWP04001 364 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 CRYGBP07316 175 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 OPN1MW2P0DN77 364 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 OPN1MW3P0DN78 364 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 FGF7P21781 194 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 CD1BP29016 333 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 DLK1P80370 383 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 HABP2Q14520 560 aaPredicted RBP9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 BSXQ3C1V8 233 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 CLEC2AQ6UVW9 174 aa9.21□□□□□ -0.93
SMARCAL1-203ENST00000392128 A0A1W2PN81 502 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 TACC2O95359 2948 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 CA2P00918 260 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 IFNA4P05014 189 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 CHRNA7P36544 502 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 MRGPRG-AS1Q2M3A8 158 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 MINOS1Q5TGZ0 78 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 LFNGQ8NES3 379 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 BPIFCQ8NFQ6 507 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 WDR83OSQ9Y284 106 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 MINOS1-NBL1R4GNA1 71 aa9.21□□□□□ -0.94
SMARCAL1-203ENST00000392128 OOSP1A8MZH6 123 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 TIMM23O14925 209 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 TOX4O94842 621 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 SNCAP37840 140 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 PSG5Q15238 335 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 C2orf83Q53S99 150 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 LHFPL4Q7Z7J7 247 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 CFHR4Q92496 578 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 TMEM68Q96MH6 324 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 NPCDR1Q9BY65 106 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 TPSG1Q9NRR2 321 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 A1L4Q6 167 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 MPDU1O75352 247 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 VENTXO95231 258 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 MAS1LP35410 378 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 DVL1P1P54792 670 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 MMD2Q8IY49 270 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
SMARCAL1-203ENST00000392128 BTBD17A6NE02 478 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 CGB1A6NKQ9 187 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 FAM157AC9JC47 383 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 E7EUB6 86 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 FNDC10F2Z333 226 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 C17orf112F2Z3M2 114 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 F8W036 122 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 AGPAT2O15120 278 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 H2AFB1P0C5Y9 115 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 CNTFRP26992 372 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 ERHP84090 104 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 SRSF3P84103 164 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 PRSS8Q16651 343 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 TUSC1Q2TAM9 212 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 CCDC144NLQ6NUI1 221 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 C16orf54Q6UWD8 224 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 OR10W1Q8NGF6 305 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 TBX15Q96SF7 602 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 RPRMQ9NS64 109 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 HILPDAQ9Y5L2 63 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 IGHV4-61A0A0C4DH41 118 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 TMEM218A2RU14 115 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 CD5P06127 495 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 RNASE2P10153 161 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 UBE2E1P51965 193 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 DSCR9P59020 149 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 SPSB3Q6PJ21 355 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 TREML4Q6UXN2 200 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 VSIRQ9H7M9 311 aa9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 TBL2Q9Y4P3 447 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-203ENST00000392128 TRAV1-1A0A0B4J248 108 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 SOX15O60248 233 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 NDUFS6O75380 124 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 MBP02144 154 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 AKR1C1Q04828 323 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 C10orf55Q5SWW7 151 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 PPP1R27Q86WC6 154 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 ZNF709Q8N972 641 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 NARS2Q96I59 477 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 NPVFQ9HCQ7 196 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 METTL1Q9UBP6 276 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 UTP20O75691 2785 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 WNK2Q9Y3S1 2297 aa9.18□□□□□ -0.94
SMARCAL1-203ENST00000392128 IGHV4-30-2A0A087WSY4 118 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 A0A1B0GW64 132 aa9.17□□□□□ -0.94
SMARCAL1-203ENST00000392128 SMCO3A2RU48 225 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms