RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 RPEL1Q2QD12 228 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 TP53TG3Q9ULZ0 132 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 WDR83OSQ9Y284 106 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 TRGV5A0A0B4J1U4 118 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 IL6RP08887 468 aaPredicted RBP12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 PTTG1IPP53801 180 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 COA6Q5JTJ3 125 aaKnown RBP12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 C1orf210Q8IVY1 113 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 ZNF439Q8NDP4 499 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 TAAR6Q96RI8 345 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 OPN3Q9H1Y3 402 aaPredicted RBP12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 TMEM140Q9NV12 185 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 TIMM9Q9Y5J7 89 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 IGHV3-21A0A0B4J1V1 117 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 SPRY3O43610 288 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 TIGITQ495A1 244 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 ETFRF1Q6IPR1 90 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 TRAT1Q6PIZ9 186 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 LINC00470Q9BZP3 86 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 PKIBQ9C010 78 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 NRN1Q9NPD7 142 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 FAM90A26D6RGX4 464 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 MLNRO43193 412 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 RAB4AP20338 218 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 REG1BP48304 166 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 PMCHL1Q16048 86 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 RNASEKQ6P5S7 137 aaKnown RBP12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 UNQ5815/PRO19632Q6UWF5 114 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 BORCS7Q96B45 105 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 MIEN1Q9BRT3 115 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 TECRQ9NZ01 308 aaKnown RBP12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 RAB29O14966 203 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 CXorf1O96002 111 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 IGHV1-2P23083 117 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 RNPS1Q15287 305 aaKnown RBP12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 TCF19Q9Y242 345 aa12.05□□□□□ -0.48
LRRFIP1-204ENST00000392000 LNP1A1A4G5 178 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 M0QZ24 198 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 EFNB3Q15768 340 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 BRS3P32247 399 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 RAB31Q13636 194 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 TPTE2P1Q5T6R2 138 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 VWA1Q6PCB0 445 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 CA2P00918 260 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 NPY1RP25929 384 aa12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 FOXA3P55318 350 aaPredicted RBP12.04□□□□□ -0.48
LRRFIP1-204ENST00000392000 TMEM210A6NLX4 147 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 KLRC4-KLRK1H3BQV0 150 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 HSBP1O75506 76 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 RANP62826 216 aaKnown RBP12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 PRB3Q04118 309 aaPredicted RBP12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 LINC00596Q86U02 117 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 Q8IYB0 196 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 ZNF355PQ9NSJ1 428 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 SLC35D1Q9NTN3 355 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 APC2O95996 2303 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 OR5G3P0C626 314 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 S100A7P31151 101 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 PDLIM4P50479 330 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 RHOBP62745 196 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 RELBQ01201 579 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 TEPPQ6URK8 271 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 STPG4Q8N801 248 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 SLC24A4Q8NFF2 622 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 BLNKQ8WV28 456 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 MBNL3Q9NUK0 354 aaKnown RBP12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 IL36BQ9NZH7 164 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 KMT2EQ8IZD2 1858 aa12.03□□□□□ -0.48
LRRFIP1-204ENST00000392000 MFAP2P55001 183 aa12.02□□□□□ -0.48
LRRFIP1-204ENST00000392000 LINC00310P59036 64 aa12.02□□□□□ -0.48
LRRFIP1-204ENST00000392000 EAF1Q96JC9 268 aaPredicted RBP12.02□□□□□ -0.48
LRRFIP1-204ENST00000392000 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.48
LRRFIP1-204ENST00000392000 WIPI2Q9Y4P8 454 aa12.02□□□□□ -0.48
LRRFIP1-204ENST00000392000 SH2D7A6NKC9 451 aaPredicted RBP12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 PROP1O75360 226 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 TNFSF13O75888 250 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 PRDX2P32119 198 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 ZNF134P52741 427 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 ZNF137PP52743 207 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 ZNF766Q5HY98 468 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 DUX4L9Q6RFH8 374 aaPredicted RBP12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 NPVFQ9HCQ7 196 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 ZNF331Q9NQX6 463 aaPredicted RBP12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 A0A1W2PN81 502 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 CYC1P08574 325 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 STAG3L2P0CL84 134 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 STAG3L3P0CL85 134 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 USF1P22415 310 aaPredicted RBP12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 FOXL1Q12952 345 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 SPRNQ5BIV9 151 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 PMCHL2Q9BQD1 86 aa12.02□□□□□ -0.49
LRRFIP1-204ENST00000392000 NKX2-8O15522 239 aa12.01□□□□□ -0.49
LRRFIP1-204ENST00000392000 TYMSP04818 313 aa12.01□□□□□ -0.49
LRRFIP1-204ENST00000392000 DUTP33316 252 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-204ENST00000392000 ACP7Q6ZNF0 438 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms