RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 HLA-DMBP28068 263 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 GCHFRP30047 84 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 NAA10P41227 235 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CSKP41240 450 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CD86P42081 329 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC1A1P43005 524 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 HAAOP46952 286 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 RHOAP61586 193 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TBPL1P62380 186 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 RCN2Q14257 317 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 RHEBQ15382 184 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 GLRA4Q5JXX5 417 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 PYHIN1Q6K0P9 492 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 Q6ZRX8 168 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 PHF5AQ7RTV0 110 aaKnown RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 FAM19A3Q7Z5A8 133 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 DEFB132Q7Z7B7 95 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 VTCN1Q7Z7D3 282 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 LRRC6Q86X45 466 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 C1orf174Q8IYL3 243 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CMTM1Q8IZ96 169 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 OFCC1Q8IZS5 231 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 VKORC1L1Q8N0U8 176 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 JAGN1Q8N5M9 183 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 PACRGLQ8N7B6 248 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CLDN22Q8N7P3 220 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 LINC00301Q8NCQ3 95 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CCDC112Q8NEF3 446 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 OR5A1Q8NGJ0 315 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 OR13C2Q8NGS9 318 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 OR13C9Q8NGT0 318 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 OR2T35Q8NGX2 323 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CAPSLQ8WWF8 208 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 RNASE6Q93091 150 aaKnown RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 PTP4A1Q93096 173 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC38A4Q969I6 547 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 C8orf44Q96CB5 159 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TLCD1Q96CP7 247 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 DYNLL2Q96FJ2 89 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CPNE2Q96FN4 548 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 SCGB3A2Q96PL1 93 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 NMNAT3Q96T66 252 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CYTH2Q99418 400 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TXLNGYQ9BZA5 131 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 HAUS4Q9H6D7 363 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CXorf21Q9HAI6 301 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM165Q9HC07 324 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TP53AIP1Q9HCN2 124 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 C6orf50Q9HD87 102 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 RAB18Q9NP72 206 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 C14orf132Q9NPU4 83 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM242Q9NWH2 141 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 NHP2Q9NX24 153 aaKnown RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 IL36BQ9NZH7 164 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 ANAPC10Q9UM13 185 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CLEC4AQ9UMR7 237 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 MGAT4BQ9UQ53 548 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC35A3Q9Y2D2 325 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 OR51B2Q9Y5P1 312 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 COMMD10Q9Y6G5 202 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 FANCMQ8IYD8 2048 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 NUP205Q92621 2012 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 MIA2Q96PC5 1412 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 STRCQ7RTU9 1775 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 ADGRG4Q8IZF6 3080 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 ADGRB1O14514 1584 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 FREM3P0C091 2139 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 BPTFQ12830 3046 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 LOXHD1Q8IVV2 1947 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 CEP192Q8TEP8 1941 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 ABCC12Q96J65 1359 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TTC41PQ6P2S7 1318 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 WDR7Q9Y4E6 1490 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SPTAN1Q13813 2472 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 TRAV3A0A0B4J244 114 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 NBDYA0A0U1RRE5 68 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 FAM240AA0A1B0GVK7 77 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 A0A1B0GXF2 115 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 A0A1W2PPE3 182 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 A4D1N5 150 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 GGT3PA6NGU5 568 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 C9JAW5 83 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 E7EUB6 86 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 I3L4J1 428 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 LEPROTO15243 131 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC16A4O15374 487 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 PIN1P1O15428 100 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 LYRM1O43325 122 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 PDCD6O75340 191 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 ERC2-IT1O76042 136 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 HLA-DQB2P05538 268 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 CXCL8P10145 99 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 DBTP11182 482 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SPTBP11277 2137 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 HIST1H1CP16403 213 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 ORM2P19652 201 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 M6PRP20645 277 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 GSTM3P21266 225 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 PPIBP23284 216 aaKnown RBP-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms