RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ZC2HC1BQ5TFG8 222 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 HES3Q5TGS1 186 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 SAMD13Q5VXD3 122 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 TOMM20LQ6UXN7 152 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 OSR2Q8N2R0 312 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 GDPD1Q8N9F7 314 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 TSC22D3Q99576 134 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 THTPAQ9BU02 230 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 C8orf17Q9NRJ1 99 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 FREM2Q5SZK8 3169 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 CELSR3Q9NYQ7 3312 aa4.51□□□□□ -1.69
TRAV35-201ENST00000390462 NUP205Q92621 2012 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 COL4A2P08572 1712 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 IGKV1-6A0A0C4DH72 117 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 IGHV5-10-1A0A0J9YXX1 117 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 H3BSA7 217 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 TRAF3IP2O43734 574 aaPredicted RBP4.5□□□□□ -1.69
TRAV35-201ENST00000390462 PFDN1O60925 122 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 SRSF10O75494 262 aaKnown RBP4.5□□□□□ -1.69
TRAV35-201ENST00000390462 SCO1O75880 301 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 IGKV1-39P01597 117 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 MAS1P04201 325 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 IGKV1D-39P04432 117 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 SPI1P17947 270 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 CD52P31358 61 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 GABRA3P34903 492 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 GLRXP35754 106 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 LINC00313P59037 77 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 DEFA1P59665 94 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 TPI1P60174 286 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 RPS20P60866 119 aaKnown RBP4.5□□□□□ -1.69
TRAV35-201ENST00000390462 CDC42P60953 191 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 GNG5P63218 68 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 FABP9Q0Z7S8 132 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 EBLN2Q6P2I7 272 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 ORMDL3Q8N138 153 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 ZNF561Q8N587 486 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 ST6GALNAC3Q8NDV1 305 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 OR4K5Q8NGD3 323 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 TMEM158Q8WZ71 300 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 ROPN1LQ96C74 230 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 REEP6Q96HR9 211 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 PYURFQ96I23 114 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 ZNF414Q96IQ9 312 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 ABHD14BQ96IU4 210 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 DNAJC30Q96LL9 226 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 CNBD2Q96M20 576 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 TSPAN32Q96QS1 320 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 ZNF331Q9NQX6 463 aaPredicted RBP4.5□□□□□ -1.69
TRAV35-201ENST00000390462 MED29Q9NX70 200 aa4.5□□□□□ -1.69
TRAV35-201ENST00000390462 DHCR7Q9UBM7 475 aaKnown RBP4.5□□□□□ -1.69
TRAV35-201ENST00000390462 ACACAQ13085 2346 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 IGHV1-45A0A0A0MS14 117 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 KLF18A0A0U1RQI7 1052 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 H0YJW9 148 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 RGS5O15539 181 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 POP7O75817 140 aaKnown RBP4.49□□□□□ -1.69
TRAV35-201ENST00000390462 CDRT1O95170 752 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 APOMO95445 188 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 CCNE2O96020 404 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 IGHV4-34P06331 123 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 ZNF688P0C7X2 276 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 IGHV1-8P0DP01 117 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 OR10J1P30954 320 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 ATP5G2Q06055 141 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 FCN2Q15485 313 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 C12orf74Q32Q52 190 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 MORN3Q6PF18 240 aaPredicted RBP4.49□□□□□ -1.69
TRAV35-201ENST00000390462 FAM24BQ8N5W8 94 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 LINC01006Q8NI28 216 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 VGLL1Q99990 258 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 RSPO3Q9BXY4 272 aaPredicted RBP4.49□□□□□ -1.69
TRAV35-201ENST00000390462 MS4A8Q9BY19 250 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 TMEM222Q9H0R3 208 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 RPP21Q9H633 154 aaKnown RBP4.49□□□□□ -1.69
TRAV35-201ENST00000390462 PARVBQ9HBI1 364 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 ACER3Q9NUN7 267 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 DNAJC12Q9UKB3 198 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 SSR3Q9UNL2 185 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 COQ4Q9Y3A0 265 aa4.49□□□□□ -1.69
TRAV35-201ENST00000390462 CCDC171Q6TFL3 1326 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 TEP1Q99973 2627 aaKnown RBP4.48□□□□□ -1.69
TRAV35-201ENST00000390462 KALRNO60229 2985 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 ASCC3Q8N3C0 2202 aaKnown RBP4.48□□□□□ -1.69
TRAV35-201ENST00000390462 IGHV1-69-2A0A0G2JMI3 117 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 IGHV7-4-1A0A0J9YVY3 117 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 A0A1B0GVX0 72 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 A0A1W2PRE2 83 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.48□□□□□ -1.69
TRAV35-201ENST00000390462 FSTL3O95633 263 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 CRYZL1O95825 349 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 LTAP01374 205 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 ADRB3P13945 408 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 CNTFRP26992 372 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 ERP29P30040 261 aaKnown RBP4.48□□□□□ -1.69
TRAV35-201ENST00000390462 NUDT1P36639 197 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 ESRRGP62508 458 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 PLPPR5Q32ZL2 321 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 HIGD2BQ4VC39 106 aa4.48□□□□□ -1.69
TRAV35-201ENST00000390462 RNASE13Q5GAN3 156 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms