RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 HLA-DRB5Q30154 266 aa14.74□□□□□ -0.05
ACTN4-202ENST00000390009 ACTR3CQ9C0K3 210 aaPredicted RBP14.74□□□□□ -0.05
ACTN4-202ENST00000390009 RPS10P5Q9NQ39 176 aa14.74□□□□□ -0.05
ACTN4-202ENST00000390009 SNRNP70P08621 437 aaKnown RBP14.73□□□□□ -0.05
ACTN4-202ENST00000390009 AGAP20933 346 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 USF1P22415 310 aaPredicted RBP14.73□□□□□ -0.05
ACTN4-202ENST00000390009 MC5RP33032 325 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 AKR1C3P42330 323 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 PRRX1P54821 245 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 ACOT6Q3I5F7 207 aaPredicted RBP14.73□□□□□ -0.05
ACTN4-202ENST00000390009 ARSJQ5FYB0 599 aaPredicted RBP14.73□□□□□ -0.05
ACTN4-202ENST00000390009 VSTM2AQ8TAG5 236 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 MGST2Q99735 147 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 CLEC7AQ9BXN2 247 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 COMMD5Q9GZQ3 224 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 NPVFQ9HCQ7 196 aa14.73□□□□□ -0.05
ACTN4-202ENST00000390009 C7orf77A4D0Y5 90 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 IGLV2-23P01705 113 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 MEOX2P50222 304 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 OR4A5Q8NH83 315 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 TMEM167AQ8TBQ9 72 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 PUS1Q9Y606 427 aaKnown RBP eCLIP14.72□□□□□ -0.05
ACTN4-202ENST00000390009 SOX15O60248 233 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 IFNA1P01562 189 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 DEFA4P12838 97 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 OPRK1P41145 380 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 PMS2P11Q13670 270 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 LY6G5BQ8NDX9 201 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 RAB24Q969Q5 203 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 GGTLC1Q9BX51 225 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 CHODLQ9H9P2 273 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 NDUFA4L2Q9NRX3 87 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 LSM4Q9Y4Z0 139 aaKnown RBP14.72□□□□□ -0.05
ACTN4-202ENST00000390009 ARHGAP32A7KAX9 2087 aa14.72□□□□□ -0.05
ACTN4-202ENST00000390009 C22orf46C9J442 243 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 CYB5BO43169 146 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 LIPFP07098 398 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 BEND2Q8NDZ0 799 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 OR10W1Q8NGF6 305 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 OR1L8Q8NGR8 309 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 C1orf159Q96HA4 380 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 SMCO4Q9NRQ5 59 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 ONECUT1Q9UBC0 465 aa14.71□□□□□ -0.05
ACTN4-202ENST00000390009 IGHV3-72A0A0B4J1Y9 119 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 hCG_1809904A0A1W2PP81 198 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 A0A1W2PPE2 198 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 A0A1W2PR64 198 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 A0A1W2PRV1 198 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 BUB1B-PAK6H3BSN5 160 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 COX7A1P24310 79 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 GCSAMLQ5JQS6 135 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 TMPRSS5Q9H3S3 457 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 VAX2Q9UIW0 290 aa14.71□□□□□ -0.06
ACTN4-202ENST00000390009 ENSAO43768 121 aaKnown RBP14.7□□□□□ -0.06
ACTN4-202ENST00000390009 CDC34P49427 236 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-202ENST00000390009 RHEBQ15382 184 aa14.7□□□□□ -0.06
ACTN4-202ENST00000390009 BSXQ3C1V8 233 aa14.7□□□□□ -0.06
ACTN4-202ENST00000390009 C2orf83Q53S99 150 aa14.7□□□□□ -0.06
ACTN4-202ENST00000390009 TEPPQ6URK8 271 aa14.7□□□□□ -0.06
ACTN4-202ENST00000390009 RBMS3Q6XE24 437 aaKnown RBP14.7□□□□□ -0.06
ACTN4-202ENST00000390009 C2CD4CQ8TF44 421 aa14.7□□□□□ -0.06
ACTN4-202ENST00000390009 RITA1Q96K30 269 aa14.7□□□□□ -0.06
ACTN4-202ENST00000390009 PATZ1Q9HBE1 687 aaKnown RBP14.7□□□□□ -0.06
ACTN4-202ENST00000390009 E7EUB6 86 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 H3BQ15 152 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 C19orf84I3L1E1 186 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 YIF1AO95070 293 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 CRYBA1P05813 215 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 CDKN1AP38936 164 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 ATP5IP56385 69 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-202ENST00000390009 VMA21Q3ZAQ7 101 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 MIC13Q5XKP0 118 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 P2RX4Q99571 388 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 ZNF430Q9H8G1 570 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-202ENST00000390009 UBTD1Q9HAC8 227 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 PXMP4Q9Y6I8 212 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 SEC14L6B5MCN3 397 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 FNDC10F2Z333 226 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 SLC25A17O43808 307 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 RNASE2P10153 161 aaKnown RBP14.69□□□□□ -0.06
ACTN4-202ENST00000390009 LGALS7P47929 136 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 OR4P4Q8NGL7 312 aa14.69□□□□□ -0.06
ACTN4-202ENST00000390009 SSBP3Q9BWW4 388 aaPredicted RBP14.68□□□□□ -0.06
ACTN4-202ENST00000390009 INSIG2Q9Y5U4 225 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 PLXNB1O43157 2135 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 IGHV1-3A0A0C4DH29 117 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 INS-IGF2F8WCM5 200 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 ERHP84090 104 aaKnown RBP14.68□□□□□ -0.06
ACTN4-202ENST00000390009 FAM90A2PQ658T7 463 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 ZFP82Q8N141 532 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 PNKDQ8N490 385 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 SSMEM1Q8WWF3 244 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 NIPSNAP3BQ9BS92 247 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 TPSG1Q9NRR2 321 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 KCNIP2Q9NS61 270 aa14.68□□□□□ -0.06
ACTN4-202ENST00000390009 AMMECR1Q9Y4X0 333 aaPredicted RBP14.68□□□□□ -0.06
ACTN4-202ENST00000390009 CGB1A6NKQ9 187 aa14.67□□□□□ -0.06
ACTN4-202ENST00000390009 C10orf55Q5SWW7 151 aa14.67□□□□□ -0.06
ACTN4-202ENST00000390009 MOB3BQ86TA1 216 aa14.67□□□□□ -0.06
ACTN4-202ENST00000390009 A0A1W2PN81 502 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms