RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 IGKV1D-42A0A075B6H8 117 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 EFNB1P98172 346 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 OR5P3Q8WZ94 311 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 Q9H3A6 140 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 STAG3L3P0CL85 134 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 VKORC1Q9BQB6 163 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 PILRAQ9UKJ1 303 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 FOCADQ5VW36 1801 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 PIKFYVEQ9Y2I7 2098 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 FXYD7P58549 80 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 TRBV9A0A0B4J1U6 114 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 RBMY1BA6NDE4 496 aaKnown RBP13.12□□□□□ -0.31
ALK-201ENST00000389048 RBMY1EA6NEQ0 496 aaKnown RBP13.12□□□□□ -0.31
ALK-201ENST00000389048 CD7P09564 240 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 RBMY1DP0C7P1 496 aaKnown RBP13.12□□□□□ -0.31
ALK-201ENST00000389048 RBMY1A1P0DJD3 496 aaKnown RBP13.12□□□□□ -0.31
ALK-201ENST00000389048 RBMY1CP0DJD4 496 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 RPP21Q9H633 154 aaKnown RBP13.12□□□□□ -0.31
ALK-201ENST00000389048 ADAMTSL1Q8N6G6 1762 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 PQLC2LA1A4F0 135 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 HIGD1CA8MV81 97 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 TMEM186Q96B77 213 aa13.12□□□□□ -0.31
ALK-201ENST00000389048 MRPL20Q9BYC9 149 aaKnown RBP13.12□□□□□ -0.31
ALK-201ENST00000389048 SRSF4Q08170 494 aaKnown RBP13.11□□□□□ -0.31
ALK-201ENST00000389048 HS3ST3B1Q9Y662 390 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 IGKV1D-43A0A0B4J1Z2 117 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 SIGLEC12Q96PQ1 595 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 PKIBQ9C010 78 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 PGPEP1LA6NFU8 196 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 NDUFS8O00217 210 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 CELA3BP08861 270 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 CD33P20138 364 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 MYO16Q9Y6X6 1858 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 UCP3P55916 312 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 PPP1R27Q86WC6 154 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 FER1L6-AS1Q8NA97 138 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 OR13A1Q8NGR1 328 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 SERF1AO75920 110 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 CD55P08174 381 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 C1orf174Q8IYL3 243 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 IFI27L2Q9H2X8 130 aa13.11□□□□□ -0.31
ALK-201ENST00000389048 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.1□□□□□ -0.31
ALK-201ENST00000389048 ZNF729A6NN14 1252 aaPredicted RBP13.1□□□□□ -0.31
ALK-201ENST00000389048 OR52E5Q8NH55 327 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 A0A0G2JMM0 328 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 A0A1W2PPB8 328 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 A0A1W2PRS3 328 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 KIR3DP1A8MWS1 328 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 TMEM250H0YL14 139 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 C1orf100Q5SVJ3 147 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 RTN4RL2Q86UN3 420 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 NPDC1Q9NQX5 325 aaPredicted RBP13.1□□□□□ -0.31
ALK-201ENST00000389048 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 H3BRM9 83 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 CDKN1AP38936 164 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 ZNF415Q09FC8 603 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 TMEM42Q69YG0 159 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 ACP7Q6ZNF0 438 aa13.1□□□□□ -0.31
ALK-201ENST00000389048 DMRTC2Q8IXT2 367 aaPredicted RBP13.09□□□□□ -0.31
ALK-201ENST00000389048 COLQQ9Y215 455 aaPredicted RBP13.09□□□□□ -0.31
ALK-201ENST00000389048 LTBRP36941 435 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 DNM1P46Q6ZS02 220 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 DEPPQ9NTK1 212 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 FAM90A26D6RGX4 464 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 C1QTNF9P0C862 333 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 FDCSPQ8NFU4 85 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.09□□□□□ -0.31
ALK-201ENST00000389048 EGR4Q05215 589 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 NSUN5P1Q3KNT7 163 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 TMEM155Q4W5P6 130 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 SDF2L1Q9HCN8 221 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 LINC00527Q9UJ94 153 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 ABCA3Q99758 1704 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 C12orf77C9JDV5 145 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 TMEM54Q969K7 222 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 ELOVL5Q9NYP7 299 aa13.09□□□□□ -0.31
ALK-201ENST00000389048 A0A1B0GUT8 65 aa13.08□□□□□ -0.31
ALK-201ENST00000389048 PTGDSP41222 190 aa13.08□□□□□ -0.31
ALK-201ENST00000389048 ARPC1AQ92747 370 aa13.08□□□□□ -0.31
ALK-201ENST00000389048 PAPPA2Q9BXP8 1791 aa13.08□□□□□ -0.32
ALK-201ENST00000389048 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.32
ALK-201ENST00000389048 BSPH1Q075Z2 132 aa13.08□□□□□ -0.32
ALK-201ENST00000389048 ZCCHC24Q8N2G6 241 aaKnown RBP13.08□□□□□ -0.32
ALK-201ENST00000389048 PRDM6Q9NQX0 595 aa13.08□□□□□ -0.32
ALK-201ENST00000389048 GZMBP10144 247 aa13.08□□□□□ -0.32
ALK-201ENST00000389048 FMC1Q96HJ9 113 aa13.08□□□□□ -0.32
ALK-201ENST00000389048 PYYP10082 97 aa13.08□□□□□ -0.32
ALK-201ENST00000389048 TEX29Q8N6K0 151 aa13.08□□□□□ -0.32
ALK-201ENST00000389048 NUTF2P61970 127 aaKnown RBP13.07□□□□□ -0.32
ALK-201ENST00000389048 COQ2Q96H96 371 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 KNTC1P50748 2209 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 FGF5P12034 268 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 LAMTOR2Q9Y2Q5 125 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 NEUROG1Q92886 237 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 RTBDNQ9BSG5 229 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms