RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CMTM5Q96DZ9 223 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 BBS2Q9BXC9 721 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 OR51I2Q9H344 312 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 FAM96AQ9H5X1 160 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 CXorf21Q9HAI6 301 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 TIMM22Q9Y584 194 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 ITPR1Q14643 2758 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 ARHGEF11O15085 1522 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
RNU6-39P-201ENST00000384344 RAD50Q92878 1312 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 TENM2Q9NT68 2774 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 CFAP47Q6ZTR5 3102 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 TRBV10-2A0A0K0K1G8 114 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 FABP12A6NFH5 140 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 I3L521 148 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 LEPROTO15243 131 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 APOEP02649 317 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 OR4D2P58180 307 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 CAV1Q03135 178 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 PRB3Q04118 309 aaPredicted RBP0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 FABP9Q0Z7S8 132 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 TMED1Q13445 227 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 FAM27BQ5VT28 67 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 CST9Q5W186 159 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 DHFR2Q86XF0 187 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 TMEM251Q8N6I4 163 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 DNAJB3Q8WWF6 145 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 ANKRD7Q92527 254 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 ROPN1LQ96C74 230 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 YIPF3Q9GZM5 350 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 OR5AC2Q9NZP5 309 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 DKKL1Q9UK85 242 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 ANAPC10Q9UM13 185 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 C15orf41Q9Y2V0 281 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 CHD5Q8TDI0 1954 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 MED14O60244 1454 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 VCANP13611 3396 aa0.73□□□□□ -2.29
RNU6-39P-201ENST00000384344 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 FREM1Q5H8C1 2179 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 GVINP1Q7Z2Y8 2422 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 OR4C45A6NMZ5 311 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 GEMIN2O14893 280 aaKnown RBP0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 PFDN6O15212 129 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 NSA2O95478 260 aaKnown RBP0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 PMP2P02689 132 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 PRB4P10163 310 aaPredicted RBP0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 CCL5P13501 91 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 KCNE1P15382 129 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 PPP1R1AQ13522 171 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 FAM9CQ8IZT9 166 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 LINC00471Q8N535 108 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 OR1M1Q8NGA1 313 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 SGMS2Q8NHU3 365 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 REG4Q9BYZ8 158 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 TRABDQ9H4I3 376 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 PXMP4Q9Y6I8 212 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 ACACBO00763 2458 aa0.72□□□□□ -2.29
RNU6-39P-201ENST00000384344 NUMA1Q14980 2115 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 KDM5CP41229 1560 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 PTPRBP23467 1997 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 TRAV14DV4A0A0A6YYC5 116 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 IRGMA1A4Y4 181 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 FUOMA2VDF0 154 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 IBA57-AS1B1ANH7 110 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 HCRTO43612 131 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 C1QAP02745 245 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 SRP19P09132 144 aaKnown RBP0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 PSMB6P28072 239 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 C1orf194Q5T5A4 169 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 C15orf53Q8NAA6 179 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 LHFPL6Q9Y693 200 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 SONP18583 2426 aaKnown RBP0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 COL24A1Q17RW2 1714 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 WDR90Q96KV7 1748 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 SIPA1L1O43166 1804 aa0.71□□□□□ -2.3
RNU6-39P-201ENST00000384344 DIDO1Q9BTC0 2240 aaKnown RBP0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 KIF15Q9NS87 1388 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 HMCN2Q8NDA2 5059 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 DNAH12Q6ZR08 3092 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 GOLGA8KD6RF30 607 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 F5H768 121 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 YEATS4O95619 227 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 IGHV3-7P01780 117 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 HLA-DRAP01903 254 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 FGF6P10767 208 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 HLA-DMBP28068 263 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 UBE2G2P60604 165 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 SKP1P63208 163 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 RPL18Q07020 188 aaKnown RBP0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 DMTNQ08495 405 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 MED21Q13503 144 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 ZNF345Q14585 488 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 TNFAIP8L3Q5GJ75 292 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 C10orf55Q5SWW7 151 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 GLT8D1Q68CQ7 371 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 COMMD7Q86VX2 200 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 FAM19A2Q8N3H0 131 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms