RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 RNF115Q9Y4L5 304 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 IGHV3OR16-13A0A075B7E8 117 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 IGHV3-74A0A0B4J1X5 117 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 NTN3O00634 580 aaPredicted RBP14.41□□□□□ -0.1
SGCB-201ENST00000381431 FOXA3P55318 350 aaPredicted RBP14.41□□□□□ -0.1
SGCB-201ENST00000381431 FNDC1Q4ZHG4 1894 aaPredicted RBP14.41□□□□□ -0.1
SGCB-201ENST00000381431 IGHV1-69-2A0A0G2JMI3 117 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 SCO2A0A1W2PP80 73 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 NDUFA2O43678 99 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 TMEM171Q8WVE6 324 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 SRSF12Q8WXF0 261 aaKnown RBP14.41□□□□□ -0.1
SGCB-201ENST00000381431 FAM131CQ96AQ9 280 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 TMEM186Q96B77 213 aa14.41□□□□□ -0.1
SGCB-201ENST00000381431 M0QZK8 103 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 ATXN7O15265 892 aaPredicted RBP14.4□□□□□ -0.1
SGCB-201ENST00000381431 GGCTO75223 188 aaKnown RBP14.4□□□□□ -0.1
SGCB-201ENST00000381431 HSPB8Q9UJY1 196 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 MRPS18CQ9Y3D5 142 aaKnown RBP14.4□□□□□ -0.1
SGCB-201ENST00000381431 IQCF6A8MYZ5 107 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 RPLP1P05386 114 aaKnown RBP14.4□□□□□ -0.1
SGCB-201ENST00000381431 CCL3L1P16619 93 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 GOLT1AQ6ZVE7 132 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 DPF1Q92782 380 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 PNRC2Q9NPJ4 139 aaKnown RBP14.4□□□□□ -0.1
SGCB-201ENST00000381431 CYTL1Q9NRR1 136 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 MGPP08493 103 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 RPL7P18124 248 aaKnown RBP14.4□□□□□ -0.1
SGCB-201ENST00000381431 ICAM4Q14773 271 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 SDF2L1Q9HCN8 221 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 TRPM7Q96QT4 1865 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 BMI1P35226 326 aa14.4□□□□□ -0.1
SGCB-201ENST00000381431 RPL24P83731 157 aaKnown RBP14.4□□□□□ -0.1
SGCB-201ENST00000381431 TMEM189A5PLL7 270 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 SOD3P08294 240 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 HINT1P49773 126 aaPredicted RBP14.39□□□□□ -0.11
SGCB-201ENST00000381431 UNQ5815/PRO19632Q6UWF5 114 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 ZNF524Q96C55 264 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 MRPL37Q9BZE1 423 aaKnown RBP14.39□□□□□ -0.11
SGCB-201ENST00000381431 TSC2P49815 1807 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 C1QTNF9BB2RNN3 333 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 KBTBD11-OT1A0A1B0GTJ5 212 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 TMEM97Q5BJF2 176 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 WDR82Q6UXN9 313 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 SCGB1D4Q6XE38 83 aa14.39□□□□□ -0.11
SGCB-201ENST00000381431 CENPFP49454 3210 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 LEPROTL1O95214 131 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 GLRX5Q86SX6 157 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 OR4D5Q8NGN0 318 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 VOPP1Q96AW1 172 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 FBXL15Q9H469 300 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 TMEM106BQ9NUM4 274 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 PGPEP1LA6NFU8 196 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 VENTXO95231 258 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 NAPSAO96009 420 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 TWIST1Q15672 202 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 LINC00305Q7Z4B0 112 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 SLC25A33Q9BSK2 321 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 CLEC7AQ9BXN2 247 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 MAS1LP35410 378 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 TFPI2P48307 235 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 RALYQ9UKM9 306 aaKnown RBP14.38□□□□□ -0.11
SGCB-201ENST00000381431 WDR87Q6ZQQ6 2873 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 NMUP48645 174 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 SPATA45Q537H7 98 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 GCSAMLQ5JQS6 135 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 IFI27L2Q9H2X8 130 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 VSIRQ9H7M9 311 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 DMRT1Q9Y5R6 373 aa14.38□□□□□ -0.11
SGCB-201ENST00000381431 PLXNA3P51805 1871 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 SPRR3Q9UBC9 169 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 IL4P05112 153 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 LOXL3P58215 753 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 RPL23P62829 140 aaKnown RBP14.37□□□□□ -0.11
SGCB-201ENST00000381431 COL5A1-AS1Q5SY13 56 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 ZNF497Q6ZNH5 498 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 TMEM183AQ8IXX5 376 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 ABHD17AQ96GS6 310 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 REG4Q9BYZ8 158 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 ZSWIM8A7E2V4 1837 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 PF4V1P10720 104 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 SELLP14151 372 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 CKS2P33552 79 aa14.37□□□□□ -0.11
SGCB-201ENST00000381431 NBEAP1P0C6P0 100 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 QRFPP83859 136 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 ZNF324BQ6AW86 544 aaPredicted RBP14.36□□□□□ -0.11
SGCB-201ENST00000381431 MIR17HGQ75NE6 70 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 MRPL20Q9BYC9 149 aaKnown RBP14.36□□□□□ -0.11
SGCB-201ENST00000381431 GSN-AS1Q9NRJ2 163 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 IGHV3OR16-8A0A075B7F1 116 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 PSPNO60542 156 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 KIR2DL2P43627 348 aaPredicted RBP14.36□□□□□ -0.11
SGCB-201ENST00000381431 DGAT2L7PQ6IED9 249 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 ZNF841Q6ZN19 808 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 C1orf162Q8NEQ5 155 aaPredicted RBP14.36□□□□□ -0.11
SGCB-201ENST00000381431 OSR1Q8TAX0 266 aaPredicted RBP14.36□□□□□ -0.11
SGCB-201ENST00000381431 THSD7BQ9C0I4 1608 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 TCF21O43680 179 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 BSPH1Q075Z2 132 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 Q0VFX4 171 aa14.36□□□□□ -0.11
SGCB-201ENST00000381431 FOXF2Q12947 444 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms