RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ICAM4Q14773 271 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 NPVFQ9HCQ7 196 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 OR2H1Q9GZK4 316 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 SF3B6Q9Y3B4 125 aaKnown RBP9.2□□□□□ -0.94
CLCN4-202ENST00000380833 ZNF688P0C7X2 276 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 CT83Q5H943 113 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 UNQ9370/PRO34162Q6UXP9 181 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
CLCN4-202ENST00000380833 HIGD1AQ9Y241 93 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 RNF222A6NCQ9 220 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 MSRB3Q8IXL7 192 aa9.2□□□□□ -0.94
CLCN4-202ENST00000380833 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 NRXN3Q9Y4C0 1643 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 CISD3P0C7P0 127 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 CRYBB3P26998 211 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 RAX2Q96IS3 184 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 GNG5P63218 68 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 OR1L8Q8NGR8 309 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 RAC3P60763 192 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 OR4D11Q8NGI4 311 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 LINC00615Q96LM1 132 aaPredicted RBP9.19□□□□□ -0.94
CLCN4-202ENST00000380833 MRM2Q9UI43 246 aaKnown RBP9.19□□□□□ -0.94
CLCN4-202ENST00000380833 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 SLC25A15Q9Y619 301 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 SRSF12Q8WXF0 261 aaKnown RBP9.19□□□□□ -0.94
CLCN4-202ENST00000380833 GPR146Q96CH1 333 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 KLHDC2Q9Y2U9 406 aa9.19□□□□□ -0.94
CLCN4-202ENST00000380833 RBMY1BA6NDE4 496 aaKnown RBP9.18□□□□□ -0.94
CLCN4-202ENST00000380833 RBMY1EA6NEQ0 496 aaKnown RBP9.18□□□□□ -0.94
CLCN4-202ENST00000380833 IGKCP01834 107 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 RBMY1DP0C7P1 496 aaKnown RBP9.18□□□□□ -0.94
CLCN4-202ENST00000380833 RBMY1A1P0DJD3 496 aaKnown RBP9.18□□□□□ -0.94
CLCN4-202ENST00000380833 RBMY1CP0DJD4 496 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 TBR1Q16650 682 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 C10orf128Q5T292 105 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 C17orf51A8MQB3 221 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 F8VVB4 439 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 F8VWA3 439 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 TMEM78Q5T7P6 136 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 C5P01031 1676 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 TRAV14DV4A0A0A6YYC5 116 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 H3BMM0 161 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 HYPMO75409 117 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 UPK3AO75631 287 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 UBE2DNLQ8IWF7 75 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 UBE2WQ96B02 151 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 TOMM7Q9P0U1 55 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 ST6GALNAC2Q9UJ37 374 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 NPIPB6E9PJ23 425 aa9.18□□□□□ -0.94
CLCN4-202ENST00000380833 MARS2Q96GW9 593 aaKnown RBP9.18□□□□□ -0.94
CLCN4-202ENST00000380833 CCL25O15444 150 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 ZNF708P17019 499 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 GLRXP35754 106 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 CDKN1AP38936 164 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 GUSBP1Q15486 140 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 DEFB104AQ8WTQ1 72 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 C21orf140B9A014 251 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 RBM3P98179 157 aaKnown RBP9.17□□□□□ -0.94
CLCN4-202ENST00000380833 DMRTC2Q8IXT2 367 aaPredicted RBP9.17□□□□□ -0.94
CLCN4-202ENST00000380833 FNDC10F2Z333 226 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 EDIL3O43854 480 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 WDR82Q6UXN9 313 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 ZAR1Q86SH2 424 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 LRTM2Q8N967 370 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 Q71RC1 249 aaPredicted RBP9.17□□□□□ -0.94
CLCN4-202ENST00000380833 SCGB3A1Q96QR1 104 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 TMEM222Q9H0R3 208 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 KLF2Q9Y5W3 355 aaPredicted RBP9.17□□□□□ -0.94
CLCN4-202ENST00000380833 PRR32B1ATL7 298 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 CDC42EP2O14613 210 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 SP9P0CG40 484 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 SMRP1Q8NCR6 262 aa9.17□□□□□ -0.94
CLCN4-202ENST00000380833 GHRHP01286 108 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 IGHV3-11P01762 117 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 PPBPP02775 128 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 MBNL2Q5VZF2 373 aaKnown RBP9.16□□□□□ -0.94
CLCN4-202ENST00000380833 PHLDA3Q9Y5J5 127 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.16□□□□□ -0.94
CLCN4-202ENST00000380833 hDV102S1A0JD36 115 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 NKX2-2O95096 273 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 CD200R1LQ6Q8B3 271 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 GLMPQ8WWB7 406 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 TRBV7-9A0A0J9YWB2 115 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 GPX1P07203 203 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 VN1R4Q7Z5H5 301 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 ICE1Q9Y2F5 2266 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 LIPT2A6NK58 231 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 GGTLC3B5MD39 225 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 C22orf46C9J442 243 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 K7N7A8 449 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 HBDP02042 147 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 C3orf79P0CE67 100 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 ATP5G2Q06055 141 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 RFLNBQ8N5W9 214 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 PRSS27Q9BQR3 290 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 CRIM1Q9NZV1 1036 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 TRBV20OR9-2A0A075B6H5 130 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 CFHR5Q9BXR6 569 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms