RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 ELLP55199 621 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-204ENST00000380749 TM4SF20Q53R12 229 aa12.93□□□□□ -0.34
HMGN1-204ENST00000380749 UBE2NLQ5JXB2 153 aa12.93□□□□□ -0.34
HMGN1-204ENST00000380749 RBPMS2Q6ZRY4 209 aaKnown RBP12.93□□□□□ -0.34
HMGN1-204ENST00000380749 GDPD1Q8N9F7 314 aa12.93□□□□□ -0.34
HMGN1-204ENST00000380749 S100A16Q96FQ6 103 aaKnown RBP12.93□□□□□ -0.34
HMGN1-204ENST00000380749 MARCH11A6NNE9 402 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 RLN1P04808 185 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 TRAPPC2P0DI81 140 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 TRAPPC2BP0DI82 140 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 RPA2P15927 270 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 PTBP1P26599 531 aaKnown RBP eCLIP12.92□□□□□ -0.34
HMGN1-204ENST00000380749 TAS2R46P59540 309 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 KCTD21Q4G0X4 260 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 ZNF585BQ52M93 769 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 TMEM69Q5SWH9 247 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 UNQ9165/PRO28630Q6UXU0 137 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 OR1L6Q8NGR2 347 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 VN1R17PQ8TDU5 208 aa12.92□□□□□ -0.34
HMGN1-204ENST00000380749 MRPL27Q9P0M9 148 aaKnown RBP12.92□□□□□ -0.34
HMGN1-204ENST00000380749 LOC102724200A0A096LPH7 203 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-204ENST00000380749 TGOLN2O43493 480 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 OR13C7P0DN81 318 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 F2RP25116 425 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 GNRHRP30968 328 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 CMTM1Q8IZ96 169 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 OR10W1Q8NGF6 305 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 OR1L8Q8NGR8 309 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 OR5H2Q8NGV7 314 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 MOB3AQ96BX8 217 aa12.91□□□□□ -0.34
HMGN1-204ENST00000380749 ZNF2Q9BSG1 426 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-204ENST00000380749 IGHV3-35A0A0C4DH35 117 aa12.9□□□□□ -0.34
HMGN1-204ENST00000380749 C8orf88P0DMB2 117 aa12.9□□□□□ -0.34
HMGN1-204ENST00000380749 SAMD12Q8N8I0 201 aa12.9□□□□□ -0.34
HMGN1-204ENST00000380749 TSPAN14Q8NG11 270 aa12.9□□□□□ -0.34
HMGN1-204ENST00000380749 LSM10Q969L4 123 aaKnown RBP12.9□□□□□ -0.34
HMGN1-204ENST00000380749 BSCL2Q96G97 398 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-204ENST00000380749 HINT2Q9BX68 163 aa12.9□□□□□ -0.34
HMGN1-204ENST00000380749 ZNF436Q9C0F3 470 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-204ENST00000380749 SNAPC5O75971 98 aa12.89□□□□□ -0.35
HMGN1-204ENST00000380749 SERPINE2P07093 398 aa12.89□□□□□ -0.35
HMGN1-204ENST00000380749 TAS2R20P59543 309 aa12.89□□□□□ -0.35
HMGN1-204ENST00000380749 SLC25A24Q6NUK1 477 aa12.89□□□□□ -0.35
HMGN1-204ENST00000380749 DHRS11Q6UWP2 260 aa12.89□□□□□ -0.35
HMGN1-204ENST00000380749 SLC38A6Q8IZM9 456 aa12.89□□□□□ -0.35
HMGN1-204ENST00000380749 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-204ENST00000380749 VCX3AQ9NNX9 186 aa12.89□□□□□ -0.35
HMGN1-204ENST00000380749 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
HMGN1-204ENST00000380749 ANAPC10Q9UM13 185 aa12.89□□□□□ -0.35
HMGN1-204ENST00000380749 F11RQ9Y624 299 aaKnown RBP12.89□□□□□ -0.35
HMGN1-204ENST00000380749 TEX50A0A1B0GTY4 177 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 OR2T8A6NH00 312 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 PGLYRP1O75594 196 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-204ENST00000380749 PMP2P02689 132 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 RFX2P48378 723 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 WT1-ASQ06250 92 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 OR2C3Q8N628 320 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 DGCR14Q96DF8 476 aaKnown RBP12.88□□□□□ -0.35
HMGN1-204ENST00000380749 ATP6V0BQ99437 205 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 FXYD6Q9H0Q3 95 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 C5orf66Q9H5L9 145 aa12.88□□□□□ -0.35
HMGN1-204ENST00000380749 GPR31O00270 319 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 S100GP29377 79 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 TGFBR1P36897 503 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 LPAR6P43657 344 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 CADM3Q8N126 398 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 OR6F1Q8NGZ6 308 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 FCAMRQ8WWV6 532 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 NDUFA4L2Q9NRX3 87 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 C21orf62Q9NYP8 219 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 PRNDQ9UKY0 176 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 OR51B2Q9Y5P1 312 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 FRAS1Q86XX4 4008 aa12.87□□□□□ -0.35
HMGN1-204ENST00000380749 NDUFA4O00483 81 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 TSPAN4O14817 238 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 KRASP01116 189 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 NAT1P18440 290 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 PRSS3P35030 304 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 G6PCP35575 357 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 APOC4P55056 127 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 LAMTOR1Q6IAA8 161 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 OR5B3Q8NH48 314 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 TMEM56Q96MV1 263 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 TSC22D3Q99576 134 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 OVOL2Q9BRP0 275 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 C20orf24Q9BUV8 137 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 FKBP11Q9NYL4 201 aa12.86□□□□□ -0.35
HMGN1-204ENST00000380749 HRH1P35367 487 aa12.85□□□□□ -0.35
HMGN1-204ENST00000380749 RPS19P39019 145 aaKnown RBP12.85□□□□□ -0.35
HMGN1-204ENST00000380749 UBAC2Q8NBM4 344 aa12.85□□□□□ -0.35
HMGN1-204ENST00000380749 NSG2Q9Y328 171 aa12.85□□□□□ -0.35
HMGN1-204ENST00000380749 KMT2AQ03164 3969 aa12.85□□□□□ -0.35
HMGN1-204ENST00000380749 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
HMGN1-204ENST00000380749 OR4C46A6NHA9 309 aa12.84□□□□□ -0.35
HMGN1-204ENST00000380749 C15orf61A6NNL5 157 aa12.84□□□□□ -0.35
HMGN1-204ENST00000380749 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
HMGN1-204ENST00000380749 Q56UQ5 140 aa12.84□□□□□ -0.35
HMGN1-204ENST00000380749 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms