RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 HCP5Q6MZN7 132 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 SLC22A18ASQ8N1D0 253 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 BEND2Q8NDZ0 799 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 MS4A6AQ9H2W1 248 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 MRPS18CQ9Y3D5 142 aaKnown RBP8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BKO60814 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BJP06899 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 LINC00271P0C7V0 271 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BOP23527 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BBP33778 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BDP58876 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BCP62807 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST2H2BEQ16778 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BHQ93079 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BNQ99877 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BMQ99879 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 OPN3Q9H1Y3 402 aaPredicted RBP8.13□□□□□ -1.11
SNX1-202ENST00000380285 DOCK7Q96N67 2140 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 H3BRM9 83 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 J3QRE1 110 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 GPR183P32249 361 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 C1QTNF5Q9BXJ0 243 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 A0A1W2PPE3 182 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 LINC00614P0C842 121 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 CCL1P22362 96 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 STARD6P59095 220 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 SNRPD3P62318 126 aaKnown RBP8.13□□□□□ -1.11
SNX1-202ENST00000380285 NRN1Q9NPD7 142 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 PTPRZ1P23471 2315 aaPredicted RBP8.13□□□□□ -1.11
SNX1-202ENST00000380285 GPX1P07203 203 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 NPPCP23582 126 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 SLC25A53Q5H9E4 307 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 SYNGR3O43761 229 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 APOHP02749 345 aaPredicted RBP8.13□□□□□ -1.11
SNX1-202ENST00000380285 ATP5G2Q06055 141 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 ATOH7Q8N100 152 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 DOCK8Q8NF50 2099 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 J3KRW8 73 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 PAX1P15863 534 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 ABHD12Q8N2K0 398 aa8.13□□□□□ -1.11
SNX1-202ENST00000380285 HTN1P15515 57 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 RAX2Q96IS3 184 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 ZNF124Q15973 351 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 TMEM160Q9NX00 188 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 A0A1W2PRE2 83 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 ATRAIDQ6UW56 229 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 FAM159AQ6UWV7 190 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 ACP7Q6ZNF0 438 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 TMEM144Q7Z5S9 345 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 NPIPB3Q92617 1050 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 IGHV3-21A0A0B4J1V1 117 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 RRHO14718 337 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 THY1P04216 161 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 APELAP0DMC3 54 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 DEFB124Q8NES8 71 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 PLPPR1Q8TBJ4 325 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 TMEM171Q8WVE6 324 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 MRAP2Q96G30 205 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 C14orf144Q96I85 54 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 TRBV6-7A0A0A0MS04 114 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 ADRA2AP08913 450 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 CRYBA2P53672 197 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 LY6G6FQ5SQ64 297 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 TIMM23BQ5SRD1 257 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 OTORQ9NRC9 128 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 ZNF257Q9Y2Q1 563 aa8.12□□□□□ -1.11
SNX1-202ENST00000380285 C4orf51C9J302 202 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 OTX1P32242 354 aaPredicted RBP8.11□□□□□ -1.11
SNX1-202ENST00000380285 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 UNQ5815/PRO19632Q6UWF5 114 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 NXT2Q9NPJ8 142 aaKnown RBP8.11□□□□□ -1.11
SNX1-202ENST00000380285 ELOVL5Q9NYP7 299 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 SMPXQ9UHP9 88 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 R4GN57 208 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 PGPEP1LA6NFU8 196 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.11□□□□□ -1.11
SNX1-202ENST00000380285 PLAUP00749 431 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 CCL8P80075 99 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 Q6ZT83 130 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 AKAP6Q13023 2319 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 SCO2A0A1W2PP80 73 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 RAMP1O60894 148 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 TMEM50AO95807 157 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 COX6A1P12074 109 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 RNFT1Q5M7Z0 435 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 TNFSF13O75888 250 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 KLRB1Q12918 225 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 FOXL1Q12952 345 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 FAM89BQ8N5H3 189 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 DERL1Q9BUN8 251 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 FSCN3Q9NQT6 498 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 SERF1AO75920 110 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 CGAP01215 116 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 MEIG1Q5JSS6 88 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 232.2 ms