RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.93
LINC00654-201ENST00000379053 A6NJY4 79 aa9.21□□□□□ -0.93
LINC00654-201ENST00000379053 NTN3O00634 580 aaPredicted RBP9.21□□□□□ -0.93
LINC00654-201ENST00000379053 MT-ND6P03923 174 aa9.21□□□□□ -0.93
LINC00654-201ENST00000379053 CD24P25063 80 aa9.21□□□□□ -0.93
LINC00654-201ENST00000379053 C1QTNF5Q9BXJ0 243 aa9.21□□□□□ -0.93
LINC00654-201ENST00000379053 IFI27L2Q9H2X8 130 aa9.21□□□□□ -0.93
LINC00654-201ENST00000379053 DEPPQ9NTK1 212 aa9.21□□□□□ -0.93
LINC00654-201ENST00000379053 SNRNP200O75643 2136 aaKnown RBP9.21□□□□□ -0.94
LINC00654-201ENST00000379053 TRBV20OR9-2A0A075B6H5 130 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 ASPHD2Q6ICH7 369 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 SPRR3Q9UBC9 169 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 TDRD15B5MCY1 1934 aaKnown RBP9.21□□□□□ -0.94
LINC00654-201ENST00000379053 TRAV24A0A0B4J272 114 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 RRHO14718 337 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 EFNA4P52798 201 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 IFITM3Q01628 133 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 SAMD13Q5VXD3 122 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 SPSB4Q96A44 273 aa9.21□□□□□ -0.94
LINC00654-201ENST00000379053 ZNF837Q96EG3 531 aaPredicted RBP9.21□□□□□ -0.94
LINC00654-201ENST00000379053 ZNF79Q15937 498 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 WNT10AQ9GZT5 417 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 RPRMQ9NS64 109 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 ACACAQ13085 2346 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 EIF3GO75821 320 aaKnown RBP eCLIP9.2□□□□□ -0.94
LINC00654-201ENST00000379053 C1QL1O75973 258 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 WNT2P09544 360 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 CMC4P56277 68 aaPredicted RBP9.2□□□□□ -0.94
LINC00654-201ENST00000379053 SMIM8Q96KF7 97 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 ZNF385CQ66K41 422 aaPredicted RBP9.2□□□□□ -0.94
LINC00654-201ENST00000379053 TEX45Q8NA69 505 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 DIRC3C9JPN6 131 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 LILRA1O75019 489 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 TMEM14DPA8MWL7 114 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 RNASE4P34096 147 aaKnown RBP9.2□□□□□ -0.94
LINC00654-201ENST00000379053 TMEM167AQ8TBQ9 72 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 TMEM158Q8WZ71 300 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 ALKBH7Q9BT30 221 aaPredicted RBP9.2□□□□□ -0.94
LINC00654-201ENST00000379053 TMEM133Q9H2Q1 129 aa9.2□□□□□ -0.94
LINC00654-201ENST00000379053 IGKV1D-43A0A0B4J1Z2 117 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 PIN1P1O15428 100 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 SAP30O75446 220 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 DOCK5Q9H7D0 1870 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 K7ENP7 123 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 FAM3BP58499 235 aaPredicted RBP9.19□□□□□ -0.94
LINC00654-201ENST00000379053 RPS11P62280 158 aaKnown RBP eCLIP9.19□□□□□ -0.94
LINC00654-201ENST00000379053 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 MDKP21741 143 aaPredicted RBP9.19□□□□□ -0.94
LINC00654-201ENST00000379053 SLC25A38Q96DW6 304 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 SPTBP11277 2137 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 SIPA1L3O60292 1781 aaPredicted RBP9.19□□□□□ -0.94
LINC00654-201ENST00000379053 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 UCP3P55916 312 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 LINC00518Q8N0U6 118 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 B4DSR2 109 aa9.19□□□□□ -0.94
LINC00654-201ENST00000379053 RGPD3A6NKT7 1758 aaPredicted RBP9.19□□□□□ -0.94
LINC00654-201ENST00000379053 IGHV1-18A0A0C4DH31 117 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 NMBP08949 121 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 TIMP3P35625 211 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 PUSL1Q8N0Z8 303 aaKnown RBP9.18□□□□□ -0.94
LINC00654-201ENST00000379053 C5orf66Q9H5L9 145 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 LOC107984156A0A0G2JMH3 177 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 NBEAP1P0C6P0 100 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 TDGF1P13385 188 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 CACNG7P62955 275 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 ZNF672Q499Z4 452 aaPredicted RBP9.18□□□□□ -0.94
LINC00654-201ENST00000379053 GCSAMLQ5JQS6 135 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 CFAP161Q6P656 301 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 ARL17AQ8IVW1 177 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 WFIKKN1Q96NZ8 548 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 SMDT1Q9H4I9 107 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 TOMM7Q9P0U1 55 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 ANKRD31Q8N7Z5 1873 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 ABCA4P78363 2273 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 PINLYPA6NC86 204 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 C17orf98A8MV24 154 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 HLA-DRB1P01911 266 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 FOXF2Q12947 444 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 WDR82Q6UXN9 313 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 PRSS33Q8NF86 280 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 SDF2L1Q9HCN8 221 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 NCOR1O75376 2440 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 GAGE10A6NGK3 116 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 IL6RP08887 468 aaPredicted RBP9.18□□□□□ -0.94
LINC00654-201ENST00000379053 DDTP30046 118 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 TMEM187Q14656 261 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 C1QL2Q7Z5L3 287 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 SIGLEC5O15389 551 aa9.18□□□□□ -0.94
LINC00654-201ENST00000379053 MCRIP2Q9BUT9 160 aaKnown RBP9.18□□□□□ -0.94
LINC00654-201ENST00000379053 IL18BPO95998 194 aa9.17□□□□□ -0.94
LINC00654-201ENST00000379053 GCHFRP30047 84 aa9.17□□□□□ -0.94
LINC00654-201ENST00000379053 RHOGP84095 191 aa9.17□□□□□ -0.94
LINC00654-201ENST00000379053 VGLL1Q99990 258 aa9.17□□□□□ -0.94
LINC00654-201ENST00000379053 PARD6GQ9BYG4 376 aaPredicted RBP9.17□□□□□ -0.94
LINC00654-201ENST00000379053 ZMAT4Q9H898 229 aa9.17□□□□□ -0.94
LINC00654-201ENST00000379053 COL5A3P25940 1745 aaPredicted RBP9.17□□□□□ -0.94
LINC00654-201ENST00000379053 C7orf66A4D0T2 115 aa9.17□□□□□ -0.94
LINC00654-201ENST00000379053 CA7P43166 264 aa9.17□□□□□ -0.94
LINC00654-201ENST00000379053 PLP1P60201 277 aa9.17□□□□□ -0.94
LINC00654-201ENST00000379053 OR4D5Q8NGN0 318 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms