RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 IGKV1-33P01594 117 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 CRYGBP07316 175 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 SFTA3P0C7M3 94 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 KLRD1Q13241 179 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 PEA15Q15121 130 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 C2orf83Q53S99 150 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 RCC1LQ96I51 464 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 TPSG1Q9NRR2 321 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 KIAA1456Q9P272 454 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 TNCP24821 2201 aa12.39□□□□□ -0.43
RAB3IP-204ENST00000378815 CGB1A6NKQ9 187 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 MPDU1O75352 247 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 PDLIM4P50479 330 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 RAB2AP61019 212 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 LCN2P80188 198 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 DEFA5Q01523 94 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 VMO1Q7Z5L0 202 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 ZNF709Q8N972 641 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 EIF5A2Q9GZV4 153 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 ARHGAP32A7KAX9 2087 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 SMCO3A2RU48 225 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 C17orf112F2Z3M2 114 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 RNASE2P10153 161 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 ARSJQ5FYB0 599 aaPredicted RBP12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 SSX7Q7RTT5 188 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 SIRPDQ9H106 197 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 SPTAN1Q13813 2472 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 FLNCQ14315 2725 aa12.38□□□□□ -0.43
RAB3IP-204ENST00000378815 IGHV2-70DA0A0C4DH43 119 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 A0A1W2PN81 502 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 MBP02144 154 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 CNTFRP26992 372 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 CHRNA7P36544 502 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 CEACAM3P40198 252 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 SRSF1Q07955 248 aaKnown RBP eCLIP12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 PSG5Q15238 335 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 C10orf55Q5SWW7 151 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 ATRAIDQ6UW56 229 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 C1orf159Q96HA4 380 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 RNF5Q99942 180 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 LSM4Q9Y4Z0 139 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 FNDC10F2Z333 226 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 TIMM23O14925 209 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 HABP2Q14520 560 aaPredicted RBP12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 PRSS8Q16651 343 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 FFAR4Q5NUL3 377 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 NPVFQ9HCQ7 196 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 SIGLEC9Q9Y336 463 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 ZNF462Q96JM2 2506 aa12.37□□□□□ -0.43
RAB3IP-204ENST00000378815 RBFOX3A6NFN3 312 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 HOXB4P17483 251 aaPredicted RBP12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 ERHP84090 104 aaKnown RBP12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 LHFPL4Q7Z7J7 247 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 SVBPQ8N300 66 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 MGST2Q99735 147 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 SMDT1Q9H4I9 107 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 SOX15O60248 233 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 VENTXO95231 258 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 WT1-ASQ06250 92 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 LCN15Q6UWW0 184 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 MMD2Q8IY49 270 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 CFHR4Q92496 578 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 RARRES2Q99969 163 aa12.36□□□□□ -0.43
RAB3IP-204ENST00000378815 PPT1P50897 306 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 ZNF787Q6DD87 383 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 HILPDAQ9Y5L2 63 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 AKAP6Q13023 2319 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 M6PRP20645 277 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 OPRK1P41145 380 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 FAM168AQ92567 244 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 GGTLC1Q9BX51 225 aa12.35□□□□□ -0.43
RAB3IP-204ENST00000378815 MAP1LC3B2A6NCE7 125 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 MAS1LP35410 378 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 MAP1LC3BQ9GZQ8 125 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 SLC39A9Q9NUM3 307 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 METTL1Q9UBP6 276 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 POLR3KQ9Y2Y1 108 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 EPG5Q9HCE0 2579 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 CTXND1A0A1B0GTU2 59 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 A0A1W2PRD5 423 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 A0A1W2PRF3 423 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 A0A1W2PRM7 423 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 FOXH1O75593 365 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 HAGHQ16775 308 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 ACOT6Q3I5F7 207 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 ZNF506Q5JVG8 444 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 MINOS1Q5TGZ0 78 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 TEPPQ6URK8 271 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 C10orf105Q8TEF2 133 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 SLC35B3Q9H1N7 401 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 MINOS1-NBL1R4GNA1 71 aa12.34□□□□□ -0.43
RAB3IP-204ENST00000378815 NDUFS8O00217 210 aa12.33□□□□□ -0.44
RAB3IP-204ENST00000378815 TOX4O94842 621 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms