RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 A0A096LPE4 126 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 A0A1W2PPZ6 126 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 F2Z2F3 143 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 AQP7O14520 342 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 DUSP3P51452 185 aaPredicted RBP6.79□□□□□ -1.32
PTPRR-203ENST00000378778 HSPE1P61604 102 aaKnown RBP6.79□□□□□ -1.32
PTPRR-203ENST00000378778 WDR86Q86TI4 376 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 SPEM1Q8N4L4 309 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 MBD6Q96DN6 1003 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 CXXC4Q9H2H0 198 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 TCF19Q9Y242 345 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 ZNF257Q9Y2Q1 563 aa6.79□□□□□ -1.32
PTPRR-203ENST00000378778 LOC105371242A0A075B767 164 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 A0A1W2PRS3 328 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 C15orf61A6NNL5 157 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 LINC00473A8K010 186 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 RFPL3SP0C7P2 107 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 ARF6P62330 175 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 FOXF2Q12947 444 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 SMIM21Q3B7S5 101 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 CT83Q5H943 113 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 TUSC5Q8IXB3 177 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 LYG1Q8N1E2 194 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 TRIB1Q96RU8 372 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 TMEM70Q9BUB7 260 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 CLEC7AQ9BXN2 247 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 RNF114Q9Y508 228 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 A0A0G2JMM0 328 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 A0A1W2PPB8 328 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 KIR3DP1A8MWS1 328 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 K7ERU9 68 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 MT-CO3P00414 261 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 IGLV2-8P01709 118 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 HNF1AP20823 631 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
PTPRR-203ENST00000378778 ACP7Q6ZNF0 438 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 ZNF596Q8TC21 504 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 SAP25Q8TEE9 199 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 RCHY1Q96PM5 261 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 S1PR3Q99500 378 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 PRNDQ9UKY0 176 aa6.78□□□□□ -1.32
PTPRR-203ENST00000378778 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 C15orf65H3BRN8 121 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 M0R2Z0 102 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 SMPD2O60906 423 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 MYF5P13349 255 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 CCL2P13500 99 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 DEFB125Q8N687 156 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 NHLRC2Q8NBF2 726 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 COQ2Q96H96 371 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 PHF7Q9BWX1 381 aaPredicted RBP6.77□□□□□ -1.33
PTPRR-203ENST00000378778 TMEM191AQ9H0A3 160 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 PRO3102Q9H379 93 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 PLEKHA3Q9HB20 300 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 TMEM14BQ9NUH8 114 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 ABI3Q9P2A4 366 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 ASXL3Q9C0F0 2248 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 FAM231BA6NCW3 169 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 ZNF503-AS2A6NEH8 195 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 C2orf70A6NJV1 201 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 HSBP1L1C9JCN9 74 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 F2RL2O00254 374 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 CD5LO43866 347 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 PSPNO60542 156 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 C8orf88P0DMB2 117 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 HIST1H1EP10412 219 aaKnown RBP6.77□□□□□ -1.33
PTPRR-203ENST00000378778 CEACAM3P40198 252 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 HINT1P49773 126 aaPredicted RBP6.77□□□□□ -1.33
PTPRR-203ENST00000378778 PSG5Q15238 335 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 PPP1R32Q7Z5V6 425 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 CACNG8Q8WXS5 425 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 DPF1Q92782 380 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 FAM122AQ96E09 287 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 NABP2Q9BQ15 211 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 SEPSECSQ9HD40 501 aaKnown RBP6.77□□□□□ -1.33
PTPRR-203ENST00000378778 PSG11Q9UQ72 335 aa6.77□□□□□ -1.33
PTPRR-203ENST00000378778 TRANK1O15050 2925 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 C21orf140B9A014 251 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 NTN3O00634 580 aaPredicted RBP6.76□□□□□ -1.33
PTPRR-203ENST00000378778 FCGR3BO75015 233 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 CGAP01215 116 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 CRYBB3P26998 211 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 CA7P43166 264 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 UNQ5815/PRO19632Q6UWF5 114 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 SPACA3Q8IXA5 215 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 DDB2Q92466 427 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 ZNF714Q96N38 554 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 AKIRIN1Q9H9L7 192 aaPredicted RBP6.76□□□□□ -1.33
PTPRR-203ENST00000378778 TNFRSF19Q9NS68 423 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 TMEM140Q9NV12 185 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 TTC28Q96AY4 2481 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 ARHGAP21Q5T5U3 1957 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 INS-IGF2F8WCM5 200 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 IGHV3-9P01782 118 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 PF4V1P10720 104 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 DEFA4P12838 97 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 ODF1Q14990 250 aa6.76□□□□□ -1.33
PTPRR-203ENST00000378778 VAMP3Q15836 100 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms