RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TRAPPC2P0DI81 140 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 TRAPPC2BP0DI82 140 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 VAMP1P23763 118 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 KLK9Q2XQG4 91 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 KHDC1LQ5JSQ8 128 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 Q6ZRM9 215 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 C18orf65Q6ZTR6 163 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 CASTOR1Q8WTX7 329 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 GPR146Q96CH1 333 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 MS4A10Q96PG2 267 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 KLK9Q9UKQ9 250 aa14.58□□□□□ -0.08
SSU72-203ENST00000378725 TNCP24821 2201 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 A0A0B4J2A0 478 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 FAM240BA0A1B0GVZ2 78 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 IGLC7A0M8Q6 106 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 TSPAN15O95858 294 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 AREGP15514 252 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 CTRB1P17538 263 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 PSMB6P28072 239 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 HSPE1P61604 102 aaKnown RBP14.57□□□□□ -0.08
SSU72-203ENST00000378725 ANKRD55Q3KP44 614 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 AARDQ4LEZ3 155 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 CTRB2Q6GPI1 263 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 HSD17B13Q7Z5P4 300 aaPredicted RBP14.57□□□□□ -0.08
SSU72-203ENST00000378725 SLC35G3Q8N808 338 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 OR4F17Q8NGA8 305 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 OR4F4Q96R69 305 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 C20orf85Q9H1P6 137 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 ZNF355PQ9NSJ1 428 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 SHPKQ9UHJ6 478 aa14.57□□□□□ -0.08
SSU72-203ENST00000378725 TET2Q6N021 2002 aaPredicted RBP14.56□□□□□ -0.08
SSU72-203ENST00000378725 TRBV9A0A0B4J1U6 114 aa14.56□□□□□ -0.08
SSU72-203ENST00000378725 C9orf170A2RU37 121 aa14.56□□□□□ -0.08
SSU72-203ENST00000378725 TRGV3P03979 118 aa14.56□□□□□ -0.08
SSU72-203ENST00000378725 OR4E1P0C645 316 aa14.56□□□□□ -0.08
SSU72-203ENST00000378725 ANXA7P20073 488 aaKnown RBP14.56□□□□□ -0.08
SSU72-203ENST00000378725 MECP2P51608 486 aaKnown RBP14.56□□□□□ -0.08
SSU72-203ENST00000378725 LYZL2Q7Z4W2 148 aa14.56□□□□□ -0.08
SSU72-203ENST00000378725 OR10W1Q8NGF6 305 aa14.56□□□□□ -0.08
SSU72-203ENST00000378725 RNASE11Q8TAA1 199 aaKnown RBP14.56□□□□□ -0.08
SSU72-203ENST00000378725 COA4Q9NYJ1 87 aa14.56□□□□□ -0.08
SSU72-203ENST00000378725 DUXBA0A1W2PPF3 345 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 TPPP2P59282 170 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 RUNX1Q01196 453 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 WT1-ASQ06250 92 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 NMSQ5H8A3 153 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 KLHL30-AS1Q8NEE0 82 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 DUSP18Q8NEJ0 188 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 C4orf3Q8WVX3 66 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 GNB4Q9HAV0 340 aa14.55□□□□□ -0.08
SSU72-203ENST00000378725 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.55□□□□□ -0.08
SSU72-203ENST00000378725 NUDT19A8MXV4 375 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 I3L521 148 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 ST8SIA3O43173 380 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 RBMXL2O75526 392 aaKnown RBP14.54□□□□□ -0.08
SSU72-203ENST00000378725 PRCDQ00LT1 54 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 DHRS2Q13268 280 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 C8orf86Q6ZUL3 223 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 LYG2Q86SG7 212 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 USMG5Q96IX5 58 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 FANCD2OSQ96PS1 177 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 NUDT15Q9NV35 164 aa14.54□□□□□ -0.08
SSU72-203ENST00000378725 TRAV6A0A075B6T7 132 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 A0A0G2JLM5 398 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 INS-IGF2F8WCM5 200 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 DUS4LO95620 317 aaKnown RBP14.53□□□□□ -0.08
SSU72-203ENST00000378725 HLA-AP01891 365 aaKnown RBP14.53□□□□□ -0.08
SSU72-203ENST00000378725 PRH1P02810 166 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 REG1AP05451 166 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 H2AFB2P0C5Z0 115 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 OR13C7P0DN81 318 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 RAB25P57735 213 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 DEFA1P59665 94 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 DEFA3P59666 94 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 C4orf46Q504U0 113 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 PDLIM3Q53GG5 364 aaPredicted RBP14.53□□□□□ -0.08
SSU72-203ENST00000378725 OR52E5Q8NH55 327 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 HINT2Q9BX68 163 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 CACNG5Q9UF02 275 aa14.53□□□□□ -0.08
SSU72-203ENST00000378725 DHFRP00374 187 aa14.52□□□□□ -0.09
SSU72-203ENST00000378725 HIST1H1BP16401 226 aaKnown RBP14.52□□□□□ -0.09
SSU72-203ENST00000378725 MYCNOSP40205 109 aa14.52□□□□□ -0.09
SSU72-203ENST00000378725 ETV3LQ6ZN32 361 aa14.52□□□□□ -0.09
SSU72-203ENST00000378725 C19orf35Q6ZS72 473 aa14.52□□□□□ -0.09
SSU72-203ENST00000378725 NRARPQ7Z6K4 114 aa14.52□□□□□ -0.09
SSU72-203ENST00000378725 NECAP1Q8NC96 275 aa14.52□□□□□ -0.09
SSU72-203ENST00000378725 RAX2Q96IS3 184 aa14.52□□□□□ -0.09
SSU72-203ENST00000378725 TMED3Q9Y3Q3 217 aa14.52□□□□□ -0.09
SSU72-203ENST00000378725 A0A1B0GU03 582 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 C13orf42A0A1B0GVH6 325 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 FAM223BA6NKX1 122 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 LGALS1P09382 135 aaKnown RBP14.51□□□□□ -0.09
SSU72-203ENST00000378725 SULT1A3P0DMM9 295 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 SULT1A4P0DMN0 295 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 SLC25A6P12236 298 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 SPCS3P61009 180 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 RHOGP84095 191 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 SMCO1Q147U7 214 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 TREML4Q6UXN2 200 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 FAM223AQ8IWN6 122 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms