RNA–Protein interactions for RNA: ENST00000378593.6

AFF4-202, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-202ENST00000378593 RNF133Q8WVZ7 376 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 PATE1Q8WXA2 126 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 MRPS24Q96EL2 167 aaKnown RBP3.4□□□□□ -1.87
AFF4-202ENST00000378593 LINC00052Q96N35 136 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 AMELYQ99218 206 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 NUDT9Q9BW91 350 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 TTTY10Q9BZA0 68 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 SLC25A39Q9BZJ4 359 aaPredicted RBP3.4□□□□□ -1.87
AFF4-202ENST00000378593 FXYD6Q9H0Q3 95 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 ATG5Q9H1Y0 275 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 TCEAL2Q9H3H9 227 aaPredicted RBP3.4□□□□□ -1.87
AFF4-202ENST00000378593 VAX2Q9UIW0 290 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 TNFSF18Q9UNG2 199 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 TDRD6O60522 2096 aaKnown RBP3.4□□□□□ -1.87
AFF4-202ENST00000378593 LRP4O75096 1905 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 ADAMTS9Q9P2N4 1935 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 ARHGAP21Q5T5U3 1957 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 C2orf16Q68DN1 1984 aa3.4□□□□□ -1.87
AFF4-202ENST00000378593 LAMA2P24043 3122 aaKnown RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 F5P12259 2224 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 IGLV3-12A0A075B6K2 115 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 LOC102725191A0A1B0GVB3 256 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 A0A1B0GVX0 72 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 LOC107986453A0A1B0GWG9 222 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 OR5H14A6NHG9 310 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 TOR1AO14656 332 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 TAAR5O14804 337 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 FGF16O43320 207 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 SNAI2O43623 268 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 NDUFA2O43678 99 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 SNRNP200O75643 2136 aaKnown RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 BRI3O95415 125 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 AHSA1O95433 338 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 GP1BAP07359 652 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 TLX1NBP0CAT3 122 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 PTHLHP12272 177 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 CTLA4P16410 223 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 CCL1P22362 96 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 FKBP2P26885 142 aaKnown RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 CBX5P45973 191 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 GALR1P47211 349 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 GFERP55789 205 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 RPL23P62829 140 aaKnown RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 NNATQ16517 81 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 DEFB110Q30KQ9 67 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 RNASE10Q5GAN6 216 aaKnown RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 PABPC1L2AQ5JQF8 200 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 C10orf91Q5T1B1 145 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 ALKAL2Q6UX46 152 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 DRAM2Q6UX65 266 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 FAM19A1Q7Z5A9 133 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 SELENOHQ8IZQ5 122 aaKnown RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 SLC22A24Q8N4F4 322 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 PLPP5Q8NEB5 264 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 SLC30A7Q8NEW0 376 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 OR13C8Q8NGS7 320 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 ZNF563Q8TA94 476 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 SLC25A44Q96H78 314 aaPredicted RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 ZNF75AQ96N20 296 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 PHB2Q99623 299 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 HSD17B10Q99714 261 aaKnown RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 TBL1XR1Q9BZK7 514 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 NMES1Q9C002 83 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 CHST6Q9GZX3 395 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 TMEM138Q9NPI0 162 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 TMEM100Q9NV29 134 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 FAM206AQ9NX38 181 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 OR52A1Q9UKL2 312 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 SLC22A13Q9Y226 551 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 PRELID1Q9Y255 219 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 TSSC4Q9Y5U2 329 aaPredicted RBP3.39□□□□□ -1.87
AFF4-202ENST00000378593 SMAD5-AS1Q9Y6J3 95 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 DOCK8Q8NF50 2099 aa3.39□□□□□ -1.87
AFF4-202ENST00000378593 TRBV6-6A0A0A6YYG2 114 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 IGHV5-10-1A0A0J9YXX1 117 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 TMEM269A0A1B0GVZ9 245 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 KANTRA0A1W2PQU2 76 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 C9orf170A2RU37 121 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 TMEM14DPA8MWL7 114 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 H7C1C5 153 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 M0R1B8 84 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 TOX3O15405 576 aaPredicted RBP3.38□□□□□ -1.87
AFF4-202ENST00000378593 NDUFS6O75380 124 aaKnown RBP3.38□□□□□ -1.87
AFF4-202ENST00000378593 SCO1O75880 301 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 SIX6O95475 246 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 RLN2P04090 185 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 KRTAP1-4P0C5Y4 121 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 ZNF823P16415 610 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 PSMB6P28072 239 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 CD34P28906 385 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 PPOXP50336 477 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 LCN6P62502 163 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 FLI1Q01543 452 aaPredicted RBP3.38□□□□□ -1.87
AFF4-202ENST00000378593 PLCXD2Q0VAA5 305 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 BTN1A1Q13410 526 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 SURF2Q15527 256 aaPredicted RBP3.38□□□□□ -1.87
AFF4-202ENST00000378593 TMEM128Q5BJH2 165 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 CYB5R2Q6BCY4 276 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 MARCH3Q86UD3 253 aa3.38□□□□□ -1.87
AFF4-202ENST00000378593 NAA40Q86UY6 237 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms