RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 ID1P41134 155 aa9.49□□□□□ -0.89
RPGR-203ENST00000378505 TMEM183AQ8IXX5 376 aa9.49□□□□□ -0.89
RPGR-203ENST00000378505 OR4D5Q8NGN0 318 aa9.49□□□□□ -0.89
RPGR-203ENST00000378505 PGLYRP4Q96LB8 373 aa9.49□□□□□ -0.89
RPGR-203ENST00000378505 YPEL2Q96QA6 119 aa9.49□□□□□ -0.89
RPGR-203ENST00000378505 PTPRDP23468 1912 aa9.49□□□□□ -0.89
RPGR-203ENST00000378505 HEATR1Q9H583 2144 aaKnown RBP9.49□□□□□ -0.89
RPGR-203ENST00000378505 MGPP08493 103 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 CKS2P33552 79 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 MAS1LP35410 378 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 TWIST1Q15672 202 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 SRSF12Q8WXF0 261 aaKnown RBP9.48□□□□□ -0.89
RPGR-203ENST00000378505 THSD7BQ9C0I4 1608 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 LOC389332A0A1B0GUA5 103 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 NPIPB11E5RHQ5 1161 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 CEACAM1P13688 526 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 IGFBP2P18065 325 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 FAM57AQ8TBR7 257 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 LOC105371267A0A1B0GV96 52 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 A0A1W2PS18 150 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 FHL1Q13642 323 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 SRSF7Q16629 238 aaKnown RBP eCLIP9.48□□□□□ -0.89
RPGR-203ENST00000378505 FAM209BQ5JX69 171 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 WDR82Q6UXN9 313 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 LINC00312Q9Y6C7 94 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 PCNX1Q96RV3 2341 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 TRBV23-1A0A0A0MS06 115 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 CGAP01215 116 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 NBEAP1P0C6P0 100 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 CBLN1P23435 193 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 RAB9AP51151 201 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 FOXG1P55316 489 aaPredicted RBP9.48□□□□□ -0.89
RPGR-203ENST00000378505 RPS20P60866 119 aaKnown RBP9.48□□□□□ -0.89
RPGR-203ENST00000378505 PEAR1Q5VY43 1037 aaPredicted RBP9.48□□□□□ -0.89
RPGR-203ENST00000378505 ZNF324BQ6AW86 544 aaPredicted RBP9.48□□□□□ -0.89
RPGR-203ENST00000378505 C16orf92Q96LL3 132 aa9.48□□□□□ -0.89
RPGR-203ENST00000378505 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 H3BTX0 84 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 RBFOX2O43251 390 aaKnown RBP eCLIP9.47□□□□□ -0.89
RPGR-203ENST00000378505 MOSP00540 346 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 PF4V1P10720 104 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 LINC00305Q7Z4B0 112 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 PNRC2Q9NPJ4 139 aaKnown RBP9.47□□□□□ -0.89
RPGR-203ENST00000378505 UQCR10Q9UDW1 63 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 ZNF407Q9C0G0 2248 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 C17orf100A8MU93 164 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 GFRA1P56159 465 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 SRSF3P84103 164 aaKnown RBP9.47□□□□□ -0.89
RPGR-203ENST00000378505 GOLT1AQ6ZVE7 132 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 COL25A1Q9BXS0 654 aaPredicted RBP9.47□□□□□ -0.89
RPGR-203ENST00000378505 PSG9Q00887 426 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 ICAM4Q14773 271 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 TMEM144Q7Z5S9 345 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 OR10J6PQ8NGY7 276 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 SSBP3Q9BWW4 388 aaPredicted RBP9.47□□□□□ -0.89
RPGR-203ENST00000378505 DPM3Q9P2X0 92 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 FER1L5A0AVI2 2057 aa9.47□□□□□ -0.89
RPGR-203ENST00000378505 TSC2P49815 1807 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 IGKV1-27A0A075B6S5 117 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 E9PQ18 207 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 SPATA45Q537H7 98 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 LINC01560Q8TB33 94 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 IL36BQ9NZH7 164 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 IL4P05112 153 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 ATP5G3P48201 142 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 MORN2Q502X0 79 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.89
RPGR-203ENST00000378505 CLDN16Q9Y5I7 305 aa9.46□□□□□ -0.89
RPGR-203ENST00000378505 FOLR2P14207 255 aa9.46□□□□□ -0.9
RPGR-203ENST00000378505 HTN1P15515 57 aa9.46□□□□□ -0.9
RPGR-203ENST00000378505 OTX1P32242 354 aaPredicted RBP9.46□□□□□ -0.9
RPGR-203ENST00000378505 QRFPP83859 136 aa9.46□□□□□ -0.9
RPGR-203ENST00000378505 BSPH1Q075Z2 132 aa9.46□□□□□ -0.9
RPGR-203ENST00000378505 ELOVL1Q9BW60 279 aa9.46□□□□□ -0.9
RPGR-203ENST00000378505 SNCGO76070 127 aa9.46□□□□□ -0.9
RPGR-203ENST00000378505 SRSF9Q13242 221 aaKnown RBP eCLIP9.46□□□□□ -0.9
RPGR-203ENST00000378505 RNASEH2CQ8TDP1 164 aaKnown RBP9.46□□□□□ -0.9
RPGR-203ENST00000378505 WFDC1Q9HC57 220 aa9.46□□□□□ -0.9
RPGR-203ENST00000378505 CYTL1Q9NRR1 136 aa9.46□□□□□ -0.9
RPGR-203ENST00000378505 SCO2A0A1W2PP80 73 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 HOXA5P20719 270 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 RPL23P62829 140 aaKnown RBP9.45□□□□□ -0.9
RPGR-203ENST00000378505 RPL24P83731 157 aaKnown RBP9.45□□□□□ -0.9
RPGR-203ENST00000378505 PLAURQ03405 335 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 ABHD17AQ96GS6 310 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 WFIKKN1Q96NZ8 548 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 RSPO3Q9BXY4 272 aaPredicted RBP9.45□□□□□ -0.9
RPGR-203ENST00000378505 MRPL20Q9BYC9 149 aaKnown RBP9.45□□□□□ -0.9
RPGR-203ENST00000378505 SPRR3Q9UBC9 169 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 HEATR5AQ86XA9 2040 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 NAPSAO96009 420 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 CD5P06127 495 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 TMEM42Q69YG0 159 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 FBXL15Q9H469 300 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 C5orf63A6NC05 138 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 CD59P13987 128 aa9.45□□□□□ -0.9
RPGR-203ENST00000378505 SLC17A3O00476 420 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms