RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
NPHP4-201ENST00000378156 OR4A5Q8NH83 315 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 SFRP2Q96HF1 295 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 WFIKKN1Q96NZ8 548 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 TUBA4BQ9H853 241 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 PKDREJQ9NTG1 2253 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 DLL1O00548 723 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 BSPH1Q075Z2 132 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 LINC00469Q8N7U9 141 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 NOTCH4Q99466 2003 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 A0A1B0GV72 72 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 C5orf63A6NC05 138 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 UCP1P25874 307 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 MAS1LP35410 378 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 RND2P52198 227 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 CLDN16Q9Y5I7 305 aa12.68□□□□□ -0.38
NPHP4-201ENST00000378156 SS18L1O75177 396 aaPredicted RBP12.67□□□□□ -0.38
NPHP4-201ENST00000378156 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
NPHP4-201ENST00000378156 TTC32Q5I0X7 151 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 FAM201AQ5SY85 155 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 RABAC1Q9UI14 185 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 MPZP25189 248 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 CA7P43166 264 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 MIC13Q5XKP0 118 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 HSPB7Q9UBY9 170 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 IQCF6A8MYZ5 107 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 FGFBP3Q8TAT2 258 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 A0A087WWC5 75 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 DNLZQ5SXM8 178 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 AMMECR1LQ6DCA0 310 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 VKORC1L1Q8N0U8 176 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 ZIC4Q8N9L1 334 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 HIST1H4GQ99525 98 aa12.67□□□□□ -0.38
NPHP4-201ENST00000378156 BDP1A6H8Y1 2624 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 TMEM136Q6ZRR5 245 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 DNM1P46Q6ZS02 220 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 PIMREGQ9BSJ6 248 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 PHF3Q92576 2039 aaKnown RBP12.66□□□□□ -0.38
NPHP4-201ENST00000378156 C8orf88P0DMB2 117 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 HOXA5P20719 270 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 PNKDQ8N490 385 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 DPRXA6NFQ7 191 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 F8VVB4 439 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 F8VWA3 439 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 LOXL3P58215 753 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 UNQ5815/PRO19632Q6UWF5 114 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 MAP1LC3AQ9H492 121 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 ZNF430Q9H8G1 570 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-201ENST00000378156 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 IGKV1D-13A0A0B4J2D9 117 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 IGKV1-13P0DP09 117 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 CTAG1AP78358 180 aa12.66□□□□□ -0.38
NPHP4-201ENST00000378156 DOCK9Q9BZ29 2069 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 PGPA6NDG6 321 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 PF4V1P10720 104 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 FAM216BQ8N7L0 139 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 ADIPOQQ15848 244 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 PSMG4Q5JS54 123 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 HEATR5AQ86XA9 2040 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 J3KRW8 73 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 ATP5IP56385 69 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-201ENST00000378156 HERPUD1Q15011 391 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 TCF24Q7RTU0 167 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 RCC1LQ96I51 464 aaKnown RBP12.65□□□□□ -0.38
NPHP4-201ENST00000378156 SPRR3Q9UBC9 169 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 MPDZO75970 2070 aa12.65□□□□□ -0.38
NPHP4-201ENST00000378156 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 CRXO43186 299 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-201ENST00000378156 PLAUP00749 431 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 PDLIM4P50479 330 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 SUPT4H1P63272 117 aaKnown RBP12.64□□□□□ -0.39
NPHP4-201ENST00000378156 RPL39P5Q59GN2 51 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 CHODLQ9H9P2 273 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 IGKV1-12A0A0C4DH73 117 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 IGKV1D-12P01611 117 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 PCSK4Q6UW60 755 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 OR13A1Q8NGR1 328 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 RNF224P0DH78 156 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 SCGB1A1P11684 91 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 CYP2G1PQ6ZSU1 146 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 DNAJC4Q9NNZ3 241 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 RAXQ9Y2V3 346 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 C17orf100A8MU93 164 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 FOXH1O75593 365 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 JOSD1Q15040 202 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-201ENST00000378156 GGNQ86UU5 652 aa12.64□□□□□ -0.39
NPHP4-201ENST00000378156 FGF16O43320 207 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 TMEM177Q53S58 311 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 WFDC3Q8IUB2 231 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 BMPERQ8N8U9 685 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 NABP1Q96AH0 204 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 AUP1Q9Y679 476 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 WISP1O95388 367 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 SPACA3Q8IXA5 215 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 TM4SF5O14894 197 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 EGR1P18146 543 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 CRYGSP22914 178 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 TMEM78Q5T7P6 136 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms