RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 AHCTF1Q8WYP5 2266 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 MOSP00540 346 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 SELENOTP62341 195 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 ZNF146Q15072 292 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 JPT1Q9UK76 154 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 AKAP6Q13023 2319 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 MTCL1Q9Y4B5 1905 aaKnown RBP10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 CD24P25063 80 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 HBBP68871 147 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 LINC00305Q7Z4B0 112 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 RCC1LQ96I51 464 aaKnown RBP10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 TCF19Q9Y242 345 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 WNK3Q9BYP7 1800 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 PLXNA1Q9UIW2 1896 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 A0A087WWC5 75 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 BRWD3Q6RI45 1802 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 SCN8AQ9UQD0 1980 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 NYNRINQ9P2P1 1898 aaKnown RBP10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 TMEM70Q9BUB7 260 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 WNT9BO14905 357 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 VENTXO95231 258 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 PCSK4Q6UW60 755 aa10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 FAM110DQ8TAY7 271 aaPredicted RBP10.16□□□□□ -0.78
PCDHA9-201ENST00000378122 BSPH1Q075Z2 132 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 GOLT1AQ6ZVE7 132 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 RALGAPA2Q2PPJ7 1873 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 A0A1W2PQM1 296 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 MRPL32Q9BYC8 188 aaKnown RBP10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 DOPEY2Q9Y3R5 2298 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 RBFOX2O43251 390 aaKnown RBP eCLIP10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 IFI6P09912 130 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 RELQ04864 619 aaPredicted RBP10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 FAM106AQ4KMX7 169 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 MBNL2Q5VZF2 373 aaKnown RBP10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 RPRMQ9NS64 109 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 TMEM160Q9NX00 188 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 MUC21A0A0G2JKD1 596 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 MUC21A0A140T8X8 626 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 CGAP01215 116 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 JOSD1Q15040 202 aaPredicted RBP10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 MUC21Q5SSG8 566 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 PNKDQ8N490 385 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 SFXN3Q9BWM7 321 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.78
PCDHA9-201ENST00000378122 IL4P05112 153 aa10.15□□□□□ -0.79
PCDHA9-201ENST00000378122 FGF5P12034 268 aa10.15□□□□□ -0.79
PCDHA9-201ENST00000378122 ADMP35318 185 aa10.15□□□□□ -0.79
PCDHA9-201ENST00000378122 TOMM7Q9P0U1 55 aa10.15□□□□□ -0.79
PCDHA9-201ENST00000378122 PHLDA3Q9Y5J5 127 aa10.15□□□□□ -0.79
PCDHA9-201ENST00000378122 ATP5G3P48201 142 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 RPS20P60866 119 aaKnown RBP10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 CYP2G1PQ6ZSU1 146 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 MFAP4P55083 255 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 IGLV3-21P80748 117 aaPredicted RBP10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 ATP5G2Q06055 141 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 OR51G1Q8NGK1 321 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 ALKBH7Q9BT30 221 aaPredicted RBP10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 BEX4Q9NWD9 120 aaPredicted RBP10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 HEATR5BQ9P2D3 2071 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 TM2D1Q9BX74 207 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 SDF2L1Q9HCN8 221 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 CACNA1IQ9P0X4 2223 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 APOBEC3AP31941 199 aaPredicted RBP10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 TCF23Q7RTU1 214 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 ZDBF2Q9HCK1 2354 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 ABCA7Q8IZY2 2146 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 TSPAN13O95857 204 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 CSRP1P21291 193 aaKnown RBP10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 FOXA3P55318 350 aaPredicted RBP10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 ZNF56Q15929 161 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 NR2C2APQ86WQ0 139 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 NPIPB3Q92617 1050 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 SLC25A28Q96A46 364 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 SPSB2Q99619 263 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 TMEM56-RWDD3S4R434 201 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 A0A0G2JMZ2 1700 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 LRRC37A2A6NM11 1700 aa10.14□□□□□ -0.79
PCDHA9-201ENST00000378122 A0A087WV48 116 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 ZNF729A6NN14 1252 aaPredicted RBP10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 TIAF1O95411 115 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 C10orf128Q5T292 105 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 HS3ST3B1Q9Y662 390 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 HIST1H1AQ02539 215 aaPredicted RBP10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 ICAM4Q14773 271 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 GPR82Q96P67 336 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 IGFBP2P18065 325 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 RNF126Q9BV68 326 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 FAM201AQ5SY85 155 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 NIT1Q86X76 327 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 C18orf12Q96KH6 178 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 LINC00527Q9UJ94 153 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 UBE2CO00762 179 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 PSCAO43653 123 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 C18orf15Q96N68 181 aa10.13□□□□□ -0.79
PCDHA9-201ENST00000378122 TMEM250H0YL14 139 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 LOC390937A0A1W2PQ73 354 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms