RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 OPN3Q9H1Y3 402 aaPredicted RBP7.09□□□□□ -1.27
VPS36-201ENST00000378060 SH2D7A6NKC9 451 aaPredicted RBP7.09□□□□□ -1.27
VPS36-201ENST00000378060 EGR1P18146 543 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 NMUP48645 174 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 RPL23P62829 140 aaKnown RBP7.09□□□□□ -1.27
VPS36-201ENST00000378060 HERPUD1Q15011 391 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 TMEM78Q5T7P6 136 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 MRPL14Q6P1L8 145 aaKnown RBP7.09□□□□□ -1.27
VPS36-201ENST00000378060 PCSK4Q6UW60 755 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 DNM1P46Q6ZS02 220 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 ERASQ7Z444 233 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 MBD3L1Q8WWY6 194 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 TIMP4Q99727 224 aa7.09□□□□□ -1.27
VPS36-201ENST00000378060 MED12Q93074 2177 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 A0A1B0GW64 132 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 PRR19A6NJB7 356 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 COLCA2A8K830 154 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 CDX4O14627 284 aaPredicted RBP7.09□□□□□ -1.28
VPS36-201ENST00000378060 PLAUP00749 431 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 GLRXP35754 106 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 SRSF3P84103 164 aaKnown RBP7.09□□□□□ -1.28
VPS36-201ENST00000378060 SRSF7Q16629 238 aaKnown RBP eCLIP7.09□□□□□ -1.28
VPS36-201ENST00000378060 PSMG4Q5JS54 123 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 ACP7Q6ZNF0 438 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 SHISA5Q8N114 240 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 TMEM170AQ8WVE7 144 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 CACNG8Q8WXS5 425 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 ZCCHC14Q8WYQ9 949 aaKnown RBP7.09□□□□□ -1.28
VPS36-201ENST00000378060 NDUFAF3Q9BU61 184 aa7.09□□□□□ -1.28
VPS36-201ENST00000378060 ZNF703Q9H7S9 590 aaPredicted RBP7.09□□□□□ -1.28
VPS36-201ENST00000378060 LOC102723996A0A087X1L8 192 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 IGHV3-21A0A0B4J1V1 117 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 RFPL3SP0C7P2 107 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 RAB9AP51151 201 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 MFAP4P55083 255 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 HBBP68871 147 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 LEMD1Q68G75 181 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 HEPN1Q6WQI6 88 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 C1orf162Q8NEQ5 155 aaPredicted RBP7.08□□□□□ -1.28
VPS36-201ENST00000378060 OR4D5Q8NGN0 318 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 NPIPB3Q92617 1050 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 PGLYRP4Q96LB8 373 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 PARD6GQ9BYG4 376 aaPredicted RBP7.08□□□□□ -1.28
VPS36-201ENST00000378060 SOX21Q9Y651 276 aaPredicted RBP7.08□□□□□ -1.28
VPS36-201ENST00000378060 TRBV24-1A0A075B6N3 115 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 ZNHIT1O43257 154 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 APELAP0DMC3 54 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 RTP5Q14D33 572 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 TWIST1Q15672 202 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 FAM90A1Q86YD7 464 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 C1QL4Q86Z23 238 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 WBP1Q96G27 269 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 ZNF71Q9NQZ8 489 aaPredicted RBP7.08□□□□□ -1.28
VPS36-201ENST00000378060 AUP1Q9Y679 476 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 TRAV1-1A0A0B4J248 108 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 C17orf98A8MV24 154 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 RRHO14718 337 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 MST1P26927 711 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 SRSF12Q8WXF0 261 aaKnown RBP7.08□□□□□ -1.28
VPS36-201ENST00000378060 IFI27L2Q9H2X8 130 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 MAP1LC3AQ9H492 121 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 CYTL1Q9NRR1 136 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 AP5S1Q9NUS5 200 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 DMXL2Q8TDJ6 3036 aa7.08□□□□□ -1.28
VPS36-201ENST00000378060 LOC389332A0A1B0GUA5 103 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 PROB1E7EW31 1015 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 TM4SF5O14894 197 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 PSG9Q00887 426 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 LINC00469Q8N7U9 141 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 DCAF16Q9NXF7 216 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 ZNF319Q9P2F9 582 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BKO60814 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BJP06899 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BOP23527 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BBP33778 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BDP58876 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BCP62807 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 SUPT4H1P63272 117 aaKnown RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST2H2BEQ16778 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BHQ93079 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 ZNF837Q96EG3 531 aaPredicted RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BNQ99877 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 HIST1H2BMQ99879 126 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 RTN4RQ9BZR6 473 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 A0A0A6YYD4 124 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 SNRPCP09234 159 aaKnown RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 CTAG1AP78358 180 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 JOSD1Q15040 202 aaPredicted RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 SAPCD1Q5SSQ6 148 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 RBPMS2Q6ZRY4 209 aaKnown RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 LYZL4Q96KX0 146 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 SPTAN1Q13813 2472 aaKnown RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 SPENQ96T58 3664 aaKnown RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 IGKV1D-13A0A0B4J2D9 117 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 SPAARA0A1B0GVQ0 90 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 NBEAP1P0C6P0 100 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 IGKV1-13P0DP09 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms