RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 LSM10Q969L4 123 aaKnown RBP16.97■□□□□ 0.31
SRM-201ENST00000376957 HINT2Q9BX68 163 aa16.97■□□□□ 0.31
SRM-201ENST00000376957 C14orf166Q9Y224 244 aaKnown RBP16.97■□□□□ 0.31
SRM-201ENST00000376957 OR51B2Q9Y5P1 312 aa16.97■□□□□ 0.31
SRM-201ENST00000376957 CEPT1Q9Y6K0 416 aa16.97■□□□□ 0.31
SRM-201ENST00000376957 TRBV7-1A0A0A6YYK4 115 aa16.96■□□□□ 0.31
SRM-201ENST00000376957 TEX50A0A1B0GTY4 177 aa16.96■□□□□ 0.31
SRM-201ENST00000376957 RBMXL2O75526 392 aaKnown RBP16.96■□□□□ 0.31
SRM-201ENST00000376957 MECP2P51608 486 aaKnown RBP16.96■□□□□ 0.31
SRM-201ENST00000376957 CD69Q07108 199 aa16.96■□□□□ 0.31
SRM-201ENST00000376957 OR1L6Q8NGR2 347 aa16.96■□□□□ 0.31
SRM-201ENST00000376957 PRRT1Q99946 306 aa16.96■□□□□ 0.31
SRM-201ENST00000376957 H0Y980 276 aa16.95■□□□□ 0.3
SRM-201ENST00000376957 REG1AP05451 166 aa16.95■□□□□ 0.3
SRM-201ENST00000376957 TNFSF8P32971 234 aa16.95■□□□□ 0.3
SRM-201ENST00000376957 SURF2Q15527 256 aaPredicted RBP16.95■□□□□ 0.3
SRM-201ENST00000376957 SCGB3A2Q96PL1 93 aa16.95■□□□□ 0.3
SRM-201ENST00000376957 PRR25Q96S07 402 aa16.95■□□□□ 0.3
SRM-201ENST00000376957 C3orf85A0A1B0GTC6 90 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 A0A1B0GW64 132 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 IGLC7A0M8Q6 106 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 ZNF701M0R085 212 aaPredicted RBP16.94■□□□□ 0.3
SRM-201ENST00000376957 GSTZ1O43708 216 aaPredicted RBP16.94■□□□□ 0.3
SRM-201ENST00000376957 GGCTO75223 188 aaKnown RBP16.94■□□□□ 0.3
SRM-201ENST00000376957 OR13C7P0DN81 318 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 MYOD1P15172 320 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 TRIM16LQ309B1 348 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 OR4D10Q8NGI6 311 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 NDUFA4L2Q9NRX3 87 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 SCP2D1Q9UJQ7 156 aa16.94■□□□□ 0.3
SRM-201ENST00000376957 CTSDP07339 412 aaPredicted RBP16.93■□□□□ 0.3
SRM-201ENST00000376957 PI3P19957 117 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 ARL3P36405 182 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 AKR1C2P52895 323 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 KLK9Q2XQG4 91 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 GDPD1Q8N9F7 314 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 OR13C8Q8NGS7 320 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 MARCH1Q8TCQ1 289 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 MRGPRFQ96AM1 343 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 SEC22AQ96IW7 307 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 FANCD2OSQ96PS1 177 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 NXF2Q9GZY0 626 aaKnown RBP16.93■□□□□ 0.3
SRM-201ENST00000376957 TMEM14BQ9NUH8 114 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 KLK9Q9UKQ9 250 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 NSG2Q9Y328 171 aa16.93■□□□□ 0.3
SRM-201ENST00000376957 TGP01266 2768 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 IGLV11-55A0A075B6I3 123 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 TEX13DA0A0J9YY54 714 aaPredicted RBP16.92■□□□□ 0.3
SRM-201ENST00000376957 CGB1A6NKQ9 187 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 C15orf61A6NNL5 157 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 NDUFB8O95169 186 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 TRBV12-3P01733 135 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 SPNP16150 400 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 FAUP35544 74 aaKnown RBP16.92■□□□□ 0.3
SRM-201ENST00000376957 AP3S2P59780 193 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 FAM106AQ4KMX7 169 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 SLC25A24Q6NUK1 477 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 RNASE11Q8TAA1 199 aaKnown RBP16.92■□□□□ 0.3
SRM-201ENST00000376957 B9D2Q9BPU9 175 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 PDCD10Q9BUL8 212 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 SIGLEC8Q9NYZ4 499 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 SMAD5-AS1Q9Y6J3 95 aa16.92■□□□□ 0.3
SRM-201ENST00000376957 BMPR1BO00238 502 aa16.91■□□□□ 0.3
SRM-201ENST00000376957 CLEC19AQ6UXS0 136 aa16.91■□□□□ 0.3
SRM-201ENST00000376957 OR10W1Q8NGF6 305 aa16.91■□□□□ 0.3
SRM-201ENST00000376957 RRNAD1Q96FB5 475 aaKnown RBP16.91■□□□□ 0.3
SRM-201ENST00000376957 IGLV1-51P01701 117 aa16.9■□□□□ 0.3
SRM-201ENST00000376957 GP9P14770 177 aa16.9■□□□□ 0.3
SRM-201ENST00000376957 PYDC2Q56P42 97 aa16.9■□□□□ 0.3
SRM-201ENST00000376957 LCN12Q6JVE5 192 aa16.9■□□□□ 0.3
SRM-201ENST00000376957 OR4C16Q8NGL9 310 aa16.9■□□□□ 0.3
SRM-201ENST00000376957 VN1R17PQ8TDU5 208 aa16.9■□□□□ 0.3
SRM-201ENST00000376957 THAP7Q9BT49 309 aaPredicted RBP16.9■□□□□ 0.3
SRM-201ENST00000376957 MCUBQ9NWR8 336 aa16.9■□□□□ 0.3
SRM-201ENST00000376957 ANKRD20A5PA0PJZ0 165 aa16.89■□□□□ 0.29
SRM-201ENST00000376957 ERHP84090 104 aaKnown RBP16.89■□□□□ 0.29
SRM-201ENST00000376957 WT1-ASQ06250 92 aa16.89■□□□□ 0.29
SRM-201ENST00000376957 GPHB5Q86YW7 130 aa16.89■□□□□ 0.29
SRM-201ENST00000376957 TP53RKQ96S44 253 aa16.89■□□□□ 0.29
SRM-201ENST00000376957 KCNIP3Q9Y2W7 256 aa16.89■□□□□ 0.29
SRM-201ENST00000376957 LSM4Q9Y4Z0 139 aaKnown RBP16.89■□□□□ 0.29
SRM-201ENST00000376957 F11RQ9Y624 299 aaKnown RBP16.89■□□□□ 0.29
SRM-201ENST00000376957 PPP5D1E7EU14 171 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 LGALS9O00182 355 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 IGHV3-23P01764 117 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 CLEC3BP05452 202 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 NHLRC4P0CG21 123 aaPredicted RBP16.88■□□□□ 0.29
SRM-201ENST00000376957 HSPE1P61604 102 aaKnown RBP16.88■□□□□ 0.29
SRM-201ENST00000376957 DHODHQ02127 395 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 SPANXN2Q5MJ10 180 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 FAAP20Q6NZ36 180 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 C19orf35Q6ZS72 473 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 OR51S1Q8NGJ8 323 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 OR2K2Q8NGT1 345 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 PLEKHA3Q9HB20 300 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 GAR1Q9NY12 217 aaKnown RBP16.88■□□□□ 0.29
SRM-201ENST00000376957 SLC2A8Q9NY64 477 aa16.88■□□□□ 0.29
SRM-201ENST00000376957 SORL1Q92673 2214 aa16.87■□□□□ 0.29
SRM-201ENST00000376957 PIGBOS1A0A0B4J2F0 54 aa16.87■□□□□ 0.29
SRM-201ENST00000376957 OR2C1O95371 312 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms