RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 PRCDQ00LT1 54 aa10.13□□□□□ -0.79
CLCN6-206ENST00000376496 FBXL15Q9H469 300 aa10.13□□□□□ -0.79
CLCN6-206ENST00000376496 ZFHX3Q15911 3703 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 APOC3P02656 99 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 FGF8P55075 233 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-206ENST00000376496 RAB2AP61019 212 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 PDLIM3Q53GG5 364 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-206ENST00000376496 ACSM6Q6P461 480 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 EIF4E3Q8N5X7 224 aaKnown RBP10.12□□□□□ -0.79
CLCN6-206ENST00000376496 OR11H6Q8NGC7 330 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 TMEM167AQ8TBQ9 72 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 SFT2D1Q8WV19 159 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 PINX1Q96BK5 328 aaKnown RBP10.12□□□□□ -0.79
CLCN6-206ENST00000376496 SIRPDQ9H106 197 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 DPM3Q9P2X0 92 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 IGHV2-70DA0A0C4DH43 119 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 PRSS46E5RG02 174 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 FCN1O00602 326 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 ZP3P21754 424 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 LGALS4P56470 323 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 HIST2H2BCQ6DN03 193 aa10.12□□□□□ -0.79
CLCN6-206ENST00000376496 TOX4O94842 621 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 ADCYAP1P18509 176 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 CD1BP29016 333 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 WT1-ASQ06250 92 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 PSG5Q15238 335 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 ZNF726P1Q15940 193 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 VMA21Q3ZAQ7 101 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 GCSAMLQ5JQS6 135 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 LCN15Q6UWW0 184 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 TBX15Q96SF7 602 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 AMMECR1Q9Y4X0 333 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-206ENST00000376496 ODF3BA8MYP8 253 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 H2AFB1P0C5Y9 115 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 USF1P22415 310 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-206ENST00000376496 TNXAQ16473 311 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 ARSJQ5FYB0 599 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-206ENST00000376496 SPSB3Q6PJ21 355 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 C10orf105Q8TEF2 133 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 NPCDR1Q9BY65 106 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 NDUFA4L2Q9NRX3 87 aa10.11□□□□□ -0.79
CLCN6-206ENST00000376496 METTL1Q9UBP6 276 aaKnown RBP10.11□□□□□ -0.79
CLCN6-206ENST00000376496 RAB19A4D1S5 217 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 HES1Q14469 280 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 ATRAIDQ6UW56 229 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 LYPD6BQ8NI32 183 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 RARRES2Q99969 163 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 PIMREGQ9BSJ6 248 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 ZNF257Q9Y2Q1 563 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 VENTXO95231 258 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 SNCAP37840 140 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 RAB5CP51148 216 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 TREML4Q6UXN2 200 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 IL34Q6ZMJ4 242 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 OR1L8Q8NGR8 309 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 OR5B3Q8NH48 314 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 SSMEM1Q8WWF3 244 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 C1orf159Q96HA4 380 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 UMAD1C9J7I0 102 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 TRIM77I1YAP6 450 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 OR13C7P0DN81 318 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 RNASE2P10153 161 aaKnown RBP10.1□□□□□ -0.79
CLCN6-206ENST00000376496 RAB11AP62491 216 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 RPP30P78346 268 aaKnown RBP10.1□□□□□ -0.79
CLCN6-206ENST00000376496 DEFA5Q01523 94 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 CLEC2AQ6UVW9 174 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 AIFM2Q9BRQ8 373 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 EIF5A2Q9GZV4 153 aaKnown RBP10.1□□□□□ -0.79
CLCN6-206ENST00000376496 SIGLEC9Q9Y336 463 aa10.1□□□□□ -0.79
CLCN6-206ENST00000376496 TMEM218A2RU14 115 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 AREGP15514 252 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 HAGHQ16775 308 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 ATP6V1FQ16864 119 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 VWC2Q2TAL6 325 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 FFAR4Q5NUL3 377 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 CCDC28AQ8IWP9 274 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-206ENST00000376496 MAPK1IP1LQ8NDC0 245 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 VSTM2AQ8TAG5 236 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 CFHR4Q92496 578 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 SLC25A22Q9H936 323 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 KPTNQ9Y664 436 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 LGALS7P47929 136 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 DVL1P1P54792 670 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-206ENST00000376496 PLGLAQ15195 96 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 MMDQ15546 238 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 PRSS8Q16651 343 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 ZNF787Q6DD87 383 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 RPP25LQ8N5L8 163 aaKnown RBP10.09□□□□□ -0.79
CLCN6-206ENST00000376496 RCC1LQ96I51 464 aaKnown RBP10.09□□□□□ -0.79
CLCN6-206ENST00000376496 MGST2Q99735 147 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 SCRT1Q9BWW7 348 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 FKBP11Q9NYL4 201 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 WDR83OSQ9Y284 106 aa10.09□□□□□ -0.79
CLCN6-206ENST00000376496 ZANQ9Y493 2812 aa10.08□□□□□ -0.8
CLCN6-206ENST00000376496 IGHV3-21A0A0B4J1V1 117 aa10.08□□□□□ -0.8
CLCN6-206ENST00000376496 KRBOX1C9JBD0 128 aa10.08□□□□□ -0.8
CLCN6-206ENST00000376496 SNRNP70P08621 437 aaKnown RBP10.08□□□□□ -0.8
CLCN6-206ENST00000376496 PPT1P50897 306 aa10.08□□□□□ -0.8
CLCN6-206ENST00000376496 GUCA2BQ16661 112 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms