RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 RETNQ9HD89 108 aa10.04□□□□□ -0.8
CLCN6-205ENST00000376492 CCL28Q9NRJ3 127 aa10.04□□□□□ -0.8
CLCN6-205ENST00000376492 FOXA2Q9Y261 457 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-205ENST00000376492 KCNIP3Q9Y2W7 256 aa10.04□□□□□ -0.8
CLCN6-205ENST00000376492 TRAV6A0A075B6T7 132 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 CREBL2O60519 120 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-205ENST00000376492 FCGR3BO75015 233 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 CRYZL1O95825 349 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 CA2P00918 260 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 OR4E1P0C645 316 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 ANXA3P12429 323 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 GNRHRP30968 328 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 BRWD1-AS2P59051 145 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 UBE2KP61086 200 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 TMEM267Q0VDI3 215 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-205ENST00000376492 FXYD3Q14802 87 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 MRGPRG-AS1Q2M3A8 158 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 MARCH1Q8TCQ1 289 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 ZNF431Q8TF32 576 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-205ENST00000376492 MS4A10Q96PG2 267 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 SLC5A7Q9GZV3 580 aa10.03□□□□□ -0.8
CLCN6-205ENST00000376492 CRYM-AS1A6NIL9 109 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 HSPB1P04792 205 aaKnown RBP10.02□□□□□ -0.81
CLCN6-205ENST00000376492 RLN1P04808 185 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 HLA-GP17693 338 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 BCAP31P51572 246 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 FXYD4P59646 89 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 SRPXP78539 464 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 SSBP2P81877 361 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-205ENST00000376492 PJVKQ0ZLH3 352 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 VMA21Q3ZAQ7 101 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 LRTM2Q8N967 370 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 MITD1Q8WV92 249 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 FAM110AQ9BQ89 295 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 FXYD6Q9H0Q3 95 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 SLC2A9Q9NRM0 540 aa10.02□□□□□ -0.81
CLCN6-205ENST00000376492 HMX3A6NHT5 357 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 PGAM2P15259 253 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 KIR2DS2P43631 304 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 PRSS8Q16651 343 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 ZNF818PQ6ZRF7 136 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 LYG2Q86SG7 212 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 OR4S2Q8NH73 311 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 ABHD5Q8WTS1 349 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 FAM103A1Q9BTL3 118 aaKnown RBP10.01□□□□□ -0.81
CLCN6-205ENST00000376492 ELOVL1Q9BW60 279 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 FLVCR2Q9UPI3 526 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 ALG5Q9Y673 324 aa10.01□□□□□ -0.81
CLCN6-205ENST00000376492 A0A0B4J293 547 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 DUXBA0A1W2PPF3 345 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 C9orf170A2RU37 121 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 MPPED1O15442 326 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 RBFOX2O43251 390 aaKnown RBP eCLIP10□□□□□ -0.81
CLCN6-205ENST00000376492 TNFSF12O43508 249 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 CNIH1O95406 144 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 SFT2D2O95562 160 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 RPA2P15927 270 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 ANXA7P20073 488 aaKnown RBP10□□□□□ -0.81
CLCN6-205ENST00000376492 PIGPP57054 158 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 TPPP2P59282 170 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 RRAS2P62070 204 aaPredicted RBP10□□□□□ -0.81
CLCN6-205ENST00000376492 DHRS2Q13268 280 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 C4orf46Q504U0 113 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 OR2B11Q5JQS5 317 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 UNQ5815/PRO19632Q6UWF5 114 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 CADM3Q8N126 398 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 LFNGQ8NES3 379 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 COQ8AQ8NI60 647 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 CD300LFQ8TDQ1 290 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 IL22RA2Q969J5 263 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 TMEM68Q96MH6 324 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 GPHA2Q96T91 129 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 PHB2Q99623 299 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 NAA60Q9H7X0 242 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 FRAS1Q86XX4 4008 aa10□□□□□ -0.81
CLCN6-205ENST00000376492 HERC2O95714 4834 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 PGLYRP1O75594 196 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-205ENST00000376492 SNAPC5O75971 98 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 HLA-AP01891 365 aaKnown RBP9.99□□□□□ -0.81
CLCN6-205ENST00000376492 SAA1P0DJI8 122 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-205ENST00000376492 CATR1Q13166 79 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 TMED4Q7Z7H5 227 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 SPAG16Q8N0X2 631 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 PUSL1Q8N0Z8 303 aaKnown RBP9.99□□□□□ -0.81
CLCN6-205ENST00000376492 GRPEL2Q8TAA5 225 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 VSTM2AQ8TAG5 236 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 TMEM230Q96A57 120 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 RHOVQ96L33 236 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 AIFM2Q9BRQ8 373 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 ZNF430Q9H8G1 570 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-205ENST00000376492 TNCP24821 2201 aa9.99□□□□□ -0.81
CLCN6-205ENST00000376492 DBX1A6NMT0 343 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 H0Y980 276 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 OR2A4O95047 310 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 BRI3O95415 125 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 HRASP01112 189 aa9.98□□□□□ -0.81
CLCN6-205ENST00000376492 AKR1C4P17516 323 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms