RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CDX4O14627 284 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-203ENST00000375274 NDUFA2O43678 99 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 NAPSAO96009 420 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 FCGR2BP31994 310 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-203ENST00000375274 GLRXP35754 106 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 FHL1Q13642 323 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 OR10AG1Q8NH19 301 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 MBD3L1Q8WWY6 194 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 AUP1Q9Y679 476 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 TRAV24A0A0B4J272 114 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 LINC00271P0C7V0 271 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 RNF144BQ7Z419 303 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 GDF15Q99988 308 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 DCAF16Q9NXF7 216 aa9.72□□□□□ -0.85
PTCH1-203ENST00000375274 DIDO1Q9BTC0 2240 aaKnown RBP9.72□□□□□ -0.85
PTCH1-203ENST00000375274 SCN5AQ14524 2016 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 TRBV24-1A0A075B6N3 115 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 C1QTNF9P0C862 333 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 PSMB2P49721 201 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 HBBP68871 147 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 GOLT1AQ6ZVE7 132 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 IFI27L2Q9H2X8 130 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 LRRK1Q38SD2 2015 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 HEATR5AQ86XA9 2040 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 MGPP08493 103 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-203ENST00000375274 DGAT2L7PQ6IED9 249 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 ZNF841Q6ZN19 808 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 ZIC4Q8N9L1 334 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 TMEM70Q9BUB7 260 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.85
PTCH1-203ENST00000375274 MOSP00540 346 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 CXCL1P09341 107 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 NBEAP1P0C6P0 100 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 BTF3P20290 206 aaKnown RBP9.71□□□□□ -0.86
PTCH1-203ENST00000375274 LINC00305Q7Z4B0 112 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 OSR1Q8TAX0 266 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-203ENST00000375274 C14orf144Q96I85 54 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 HIST1H2BLQ99880 126 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 FOXJ2Q9P0K8 574 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 TMEM78Q5T7P6 136 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 LEMD1Q68G75 181 aa9.71□□□□□ -0.86
PTCH1-203ENST00000375274 TCF20Q9UGU0 1960 aaKnown RBP9.7□□□□□ -0.86
PTCH1-203ENST00000375274 TRAV9-1A0A075B6T8 112 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 QRFPP83859 136 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 RTN4RL2Q86UN3 420 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 FGFBP3Q8TAT2 258 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 MRPS18CQ9Y3D5 142 aaKnown RBP9.7□□□□□ -0.86
PTCH1-203ENST00000375274 SERF1AO75920 110 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 LIPFP07098 398 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 PCP4P48539 62 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 CYB5R2Q6BCY4 276 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 NABP1Q96AH0 204 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 FTH1P19P0C7X4 201 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-203ENST00000375274 LOXL4Q96JB6 756 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 KCNS1Q96KK3 526 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 TMEM242Q9NWH2 141 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 FABP2P12104 132 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 ADCYAP1P18509 176 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 GATA2P23769 480 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-203ENST00000375274 DLX1P56177 255 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 FAM201AQ5SY85 155 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 C1QL4Q86Z23 238 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 HIST3H2BBQ8N257 126 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
PTCH1-203ENST00000375274 DOCK8Q8NF50 2099 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 PTPRDP23468 1912 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 PCNX1Q96RV3 2341 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 IGKV1-27A0A075B6S5 117 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 C5orf63A6NC05 138 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 RAMP3O60896 148 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 CELA3BP08861 270 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 PLAURQ03405 335 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 TBR1Q16650 682 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 GFI1BQ5VTD9 330 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 ZNF324BQ6AW86 544 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-203ENST00000375274 MIR17HGQ75NE6 70 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 TCF23Q7RTU1 214 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 HEATR1Q9H583 2144 aaKnown RBP9.69□□□□□ -0.86
PTCH1-203ENST00000375274 IQCF6A8MYZ5 107 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 CLPSP04118 112 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 GCSHP23434 173 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 LHX2P50458 406 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 MFAP4P55083 255 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 ZNF497Q6ZNH5 498 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 FAM19A2Q8N3H0 131 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-203ENST00000375274 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 GUCD1Q96NT3 240 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 TMEM208Q9BTX3 173 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 TMEM106BQ9NUM4 274 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 PGPEP1LA6NFU8 196 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 GPR6P46095 362 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-203ENST00000375274 C2orf83Q53S99 150 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 TMEM144Q7Z5S9 345 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 FDCSPQ8NFU4 85 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 FAM131CQ96AQ9 280 aa9.69□□□□□ -0.86
PTCH1-203ENST00000375274 TRAV1-1A0A0B4J248 108 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 TIMM23BQ5SRD1 257 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms