RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CD55P08174 381 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 IGHV3-43DP0DP04 118 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 PSG1P11464 419 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 CD1BP29016 333 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 RPS20P60866 119 aaKnown RBP6.81□□□□□ -1.32
UBR4-202ENST00000375224 ZNF816Q0VGE8 651 aaPredicted RBP6.81□□□□□ -1.32
UBR4-202ENST00000375224 ACOT6Q3I5F7 207 aaPredicted RBP6.81□□□□□ -1.32
UBR4-202ENST00000375224 OR5B12Q96R08 314 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 AGMATQ9BSE5 352 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 CALYQ9NYX4 217 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 TRAV26-1A0A087WT03 109 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 TRGV10A0A0A0MS01 117 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 OR10J4P0C629 311 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 P0C879 139 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 IAPPP10997 89 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 RAB9AP51151 201 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 HOXA4Q00056 320 aaPredicted RBP6.8□□□□□ -1.32
UBR4-202ENST00000375224 IZUMO4Q1ZYL8 232 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 STUMQ69YW2 141 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 VKORC1Q9BQB6 163 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 C17orf98A8MV24 154 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 RBFOX2O43251 390 aaKnown RBP eCLIP6.8□□□□□ -1.32
UBR4-202ENST00000375224 RAMP3O60896 148 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 S1PR2O95136 353 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 G6PCP35575 357 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 TEX36Q5VZQ5 186 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.8□□□□□ -1.32
UBR4-202ENST00000375224 ZNRF1Q8ND25 227 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 C5orf30Q96GV9 206 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 PSMG3Q9BT73 122 aaPredicted RBP6.8□□□□□ -1.32
UBR4-202ENST00000375224 DCTN5Q9BTE1 182 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 HINT2Q9BX68 163 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 ZGRF1Q86YA3 2104 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 DPRXA6NFQ7 191 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 DEFB108AA8MXU0 73 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 H3BP45 60 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 DUTP33316 252 aaKnown RBP6.8□□□□□ -1.32
UBR4-202ENST00000375224 CKS1BP61024 79 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 TMEM267Q0VDI3 215 aaPredicted RBP6.8□□□□□ -1.32
UBR4-202ENST00000375224 SPRNQ5BIV9 151 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 SHISA2Q6UWI4 295 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 OR4S2Q8NH73 311 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 VN1R17PQ8TDU5 208 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 CITED1Q99966 193 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 SRD5A3Q9H8P0 318 aa6.8□□□□□ -1.32
UBR4-202ENST00000375224 CADP27708 2225 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 KBTBD11-OT1A0A1B0GTJ5 212 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 C17orf100A8MU93 164 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 ARL3P36405 182 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 PAX2Q02962 417 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 BSPH1Q075Z2 132 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 LTC4SQ16873 150 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 SPANXN5Q5MJ07 72 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 C22orf34Q6ZV56 151 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 ZNF295-AS1Q8N0V1 137 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 KLHDC1Q8N7A1 406 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 TRAV38-1A0A0B4J264 116 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 MMP23AO75900 390 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 CGB3P0DN86 165 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 CGB7P0DN87 165 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 SCGB1A1P11684 91 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 LOXL3P58215 753 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 ERVK-16P61578 105 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 SERF2P84101 59 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 ADIPOQQ15848 244 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 COA6Q5JTJ3 125 aaKnown RBP6.79□□□□□ -1.32
UBR4-202ENST00000375224 TMEM14EPQ6UXP3 125 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 ZNF788Q6ZQV5 615 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 Q6ZVH6 145 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 ZNF525Q8N782 197 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 OR4B1Q8NGF8 309 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 RBMXL1Q96E39 390 aaKnown RBP6.79□□□□□ -1.32
UBR4-202ENST00000375224 ACACAQ13085 2346 aa6.79□□□□□ -1.32
UBR4-202ENST00000375224 RBFOX3A6NFN3 312 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 GFRA3O60609 400 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 C1QL1O75973 258 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 THBDP07204 575 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 CEACAM3P40198 252 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 ADTRPQ96IZ2 230 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 GAFA1Q96PS6 74 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 S1PR3Q99500 378 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 ASPMQ8IZT6 3477 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 APC2O95996 2303 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 GAGE12BA1L429 117 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 LINC00473A8K010 186 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 M0R1X1 148 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 LIPFP07098 398 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 SLC38A11Q08AI6 406 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 LRRC75BQ2VPJ9 315 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 ABHD14AQ9BUJ0 271 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 KIAA1456Q9P272 454 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 TIMM9Q9Y5J7 89 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 TRBV24-1A0A075B6N3 115 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 hADV38S2A0JD32 116 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 BRWD1-AS2P59051 145 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 SMAGPQ0VAQ4 97 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 C17orf58Q2M2W7 97 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 FAM53AQ6NSI3 398 aaPredicted RBP6.78□□□□□ -1.32
UBR4-202ENST00000375224 GTF2H5Q6ZYL4 71 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 MTURNQ8N3F0 131 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms