RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 LAMB2P55268 1798 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 B9A039 149 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 WISP3O95389 354 aaPredicted RBP12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 GCHFRP30047 84 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 ERVK11-1P61568 191 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 ACP7Q6ZNF0 438 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 PPP1R27Q86WC6 154 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 OR13A1Q8NGR1 328 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 NUDT11Q96G61 164 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 LY75O60449 1722 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 PPIFP30405 207 aaKnown RBP12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 SPSB4Q96A44 273 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 C14orf144Q96I85 54 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 GNG5P63218 68 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 TMEM136Q6ZRR5 245 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 PKIBQ9C010 78 aa12.44□□□□□ -0.42
NOTCH4-201ENST00000375023 SMIM6P0DI80 62 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 TMEM186Q96B77 213 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 TMEM101Q96IK0 257 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 Q96MF0 132 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 TRAV30A0A087WSZ9 112 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 RNF223E7ERA6 249 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 OR11H4Q8NGC9 324 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 GREM1O60565 184 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 TSPOP30536 169 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 DMRTA1Q5VZB9 504 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 RNASEH2CQ8TDP1 164 aaKnown RBP12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 ZNF729A6NN14 1252 aaPredicted RBP12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 IGHV1-2P23083 117 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 TEX45Q8NA69 505 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 OR9G4Q8NGQ1 327 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 TMEM70Q9BUB7 260 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 NDUFA2O43678 99 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
NOTCH4-201ENST00000375023 ZNF146Q15072 292 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 DNM1P46Q6ZS02 220 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 OR10AG1Q8NH19 301 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 JKAMPQ9P055 326 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 NMBP08949 121 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 ERGP11308 486 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 MESP1Q9BRJ9 268 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 DNAL4O96015 105 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 Q6ZT83 130 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 RGPD3A6NKT7 1758 aaPredicted RBP12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 PTGDSP41222 190 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 FAM166AQ6J272 317 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 ZNF703Q9H7S9 590 aaPredicted RBP12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 ESPL1Q14674 2120 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 IGHV3-64A0A075B6Q5 118 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 FOLR2P14207 255 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 FAM209AQ5JX71 171 aa12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 PARD6GQ9BYG4 376 aaPredicted RBP12.42□□□□□ -0.42
NOTCH4-201ENST00000375023 TRBV5-7A0A0A0MS05 114 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 TMEM219Q86XT9 240 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 MSGN1A6NI15 193 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 TYMSP04818 313 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 TRGC1P0CF51 173 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 FAM19A2Q8N3H0 131 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 CHCHD2Q9Y6H1 151 aaPredicted RBP12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 LDLRAD2Q5SZI1 272 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 C9orf106Q8NAJ2 232 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 C12orf77C9JDV5 145 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 OR5AN1Q8NGI8 311 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 CLDND2Q8NHS1 167 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 ARPC1AQ92747 370 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 PMCHL2Q9BQD1 86 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 ATP5G3P48201 142 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 EIF4EBP2Q13542 120 aaPredicted RBP12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 TMEM95Q3KNT9 176 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 TCF24Q7RTU0 167 aa12.41□□□□□ -0.42
NOTCH4-201ENST00000375023 TGFBR3LH3BV60 316 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 PEX7O00628 323 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 HLA-DQA1P01909 254 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 C10orf128Q5T292 105 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 ZNF324BQ6AW86 544 aaPredicted RBP12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 MIR17HGQ75NE6 70 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 APOMO95445 188 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 MRPL16Q9NX20 251 aaKnown RBP12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 SEMA5BQ9P283 1151 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 APOHP02749 345 aaPredicted RBP12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 LBHQ53QV2 105 aaPredicted RBP12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 DOCK3Q8IZD9 2030 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 IGHV2OR16-5A0A0B4J2B6 119 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 FBLN7Q53RD9 439 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 SLC25A34Q6PIV7 304 aa12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 COL25A1Q9BXS0 654 aaPredicted RBP12.4□□□□□ -0.42
NOTCH4-201ENST00000375023 NPIPB4C9JG80 1138 aa12.4□□□□□ -0.43
NOTCH4-201ENST00000375023 HLA-DRB1P01911 266 aa12.4□□□□□ -0.43
NOTCH4-201ENST00000375023 ASIPP42127 132 aa12.4□□□□□ -0.43
NOTCH4-201ENST00000375023 SRSF6Q13247 344 aaKnown RBP12.4□□□□□ -0.43
NOTCH4-201ENST00000375023 CACNA1IQ9P0X4 2223 aa12.39□□□□□ -0.43
NOTCH4-201ENST00000375023 KIF13BQ9NQT8 1826 aa12.39□□□□□ -0.43
NOTCH4-201ENST00000375023 A0A087WV48 116 aa12.39□□□□□ -0.43
NOTCH4-201ENST00000375023 EFEMP2O95967 443 aa12.39□□□□□ -0.43
NOTCH4-201ENST00000375023 EVI2AP22794 236 aa12.39□□□□□ -0.43
NOTCH4-201ENST00000375023 NPC2P61916 151 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms