RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TRBV24-1A0A075B6N3 115 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 ARRDC5A6NEK1 342 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 GGTLC3B5MD39 225 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 H3BTX0 84 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 CGAP01215 116 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 IL3P08700 152 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 TFPIP10646 304 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 GATA1P15976 413 aaPredicted RBP6.52□□□□□ -1.37
USP48-203ENST00000374732 ALG10Q5BKT4 473 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 TMEM256Q8N2U0 113 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 OR4K13Q8NH42 304 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 TMEM170AQ8WVE7 144 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 ZNF501Q96CX3 271 aaPredicted RBP6.52□□□□□ -1.37
USP48-203ENST00000374732 COX14Q96I36 57 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 DEC1Q9P2X7 70 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 DOCK6Q96HP0 2047 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 ETV2O00321 342 aaPredicted RBP6.51□□□□□ -1.37
USP48-203ENST00000374732 LMX1BO60663 402 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 STK17BO94768 372 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 FKBP2P26885 142 aaKnown RBP6.51□□□□□ -1.37
USP48-203ENST00000374732 TAS2R46P59540 309 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 PLXDC1Q8IUK5 500 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 SSC4DQ8WTU2 575 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 ADAT3Q96EY9 351 aaPredicted RBP6.51□□□□□ -1.37
USP48-203ENST00000374732 SPACA5Q96QH8 159 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 BANF2Q9H503 90 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 KIAA0100Q14667 2235 aaKnown RBP6.51□□□□□ -1.37
USP48-203ENST00000374732 TRAV14DV4A0A0A6YYC5 116 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 A0A1W2PP11 408 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 C5orf63A6NC05 138 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 SDCBPO00560 298 aaPredicted RBP6.51□□□□□ -1.37
USP48-203ENST00000374732 LGALS1P09382 135 aaKnown RBP6.51□□□□□ -1.37
USP48-203ENST00000374732 GP9P14770 177 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 LIFP15018 202 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 FSTP19883 344 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 EMDP50402 254 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 KRTDAPP60985 99 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 WFDC2Q14508 124 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 C9orf153Q5TBE3 101 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 TMEM179BQ7Z7N9 219 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 PIP4P1Q86T03 277 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 TMEM147Q9BVK8 224 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 SSBP3Q9BWW4 388 aaPredicted RBP6.51□□□□□ -1.37
USP48-203ENST00000374732 SPANXCQ9NY87 97 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 TAAR3PQ9P1P4 343 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 PROCRQ9UNN8 238 aa6.51□□□□□ -1.37
USP48-203ENST00000374732 DLX1P56177 255 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 SFRP4Q6FHJ7 346 aaPredicted RBP6.5□□□□□ -1.37
USP48-203ENST00000374732 SPSB3Q6PJ21 355 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 THAP8Q8NA92 274 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 CMTM2Q8TAZ6 248 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 TM2D1Q9BX74 207 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 SNRPGP15A8MWD9 76 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 SOCS1O15524 211 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 NUPR1O60356 82 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 RENP00797 406 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 APOC4P55056 127 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 ZNF718Q3SXZ3 478 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 TMEM64Q6YI46 380 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.5□□□□□ -1.37
USP48-203ENST00000374732 FAM213BQ8TBF2 198 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 FTSJ1Q9UET6 329 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 FAM240AA0A1B0GVK7 77 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 EPOPA6NHQ4 379 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 DHRS3O75911 302 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 CPSF4O95639 269 aaKnown RBP6.5□□□□□ -1.37
USP48-203ENST00000374732 GPANK1O95872 356 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 IGHMP01871 453 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 SEC11BP0C7V7 166 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 FAM78AQ5JUQ0 283 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 TMEM14EPQ6UXP3 125 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 CLECL1Q8IZS7 167 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 PRSS33Q8NF86 280 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 OR10G8Q8NGN5 311 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 BORCS7Q96B45 105 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 MS4A6EQ96DS6 147 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 GFI1Q99684 422 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 NIPSNAP3BQ9BS92 247 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 IFI27L2Q9H2X8 130 aa6.5□□□□□ -1.37
USP48-203ENST00000374732 COL4A2P08572 1712 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 FANCMQ8IYD8 2048 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 DAPP51397 102 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 CAV3P56539 151 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 FOXF2Q12947 444 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 MIDNQ504T8 468 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 COMMD6Q7Z4G1 85 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 SGPP2Q8IWX5 399 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 MRPL32Q9BYC8 188 aaKnown RBP6.49□□□□□ -1.37
USP48-203ENST00000374732 REEP1Q9H902 201 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 COL4A3Q01955 1670 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 A0A1W2PNR3 127 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 GABARAPH6UMI1 98 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 K7ESM1 405 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 OVOL3O00110 214 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 GATA2P23769 480 aaPredicted RBP6.49□□□□□ -1.37
USP48-203ENST00000374732 RNASE12Q5GAN4 147 aaKnown RBP6.49□□□□□ -1.37
USP48-203ENST00000374732 C9orf40Q8IXQ3 194 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 GAPTQ8N292 157 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms