RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 UBE2KP61086 200 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 RPS23P62266 143 aaKnown RBP3.9□□□□□ -1.79
USP48-202ENST00000374730 RPL30P62888 115 aaKnown RBP3.9□□□□□ -1.79
USP48-202ENST00000374730 CCL20P78556 96 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 AESQ08117 197 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 SLC38A11Q08AI6 406 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 ARL16Q0P5N6 197 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 FGFRL1Q8N441 504 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 GCSAMQ8N6F7 178 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 CD177Q8N6Q3 437 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 OR13A1Q8NGR1 328 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 UBALD1Q8TB05 177 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 CD300LFQ8TDQ1 290 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 MRGPRDQ8TDS7 321 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 TCTEX1D2Q8WW35 142 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 TAF15Q92804 592 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP48-202ENST00000374730 HIST1H2BAQ96A08 127 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 MALSU1Q96EH3 234 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 C14orf79Q96F83 325 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 YPEL4Q96NS1 127 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 CIB3Q96Q77 187 aaPredicted RBP3.9□□□□□ -1.79
USP48-202ENST00000374730 CLCC1Q96S66 551 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 SFXN3Q9BWM7 321 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 WDR61Q9GZS3 305 aaKnown RBP3.9□□□□□ -1.79
USP48-202ENST00000374730 RBKSQ9H477 322 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 RAB9BQ9NP90 201 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 RPS10P5Q9NQ39 176 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 RPRMQ9NS64 109 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.9□□□□□ -1.79
USP48-202ENST00000374730 UFSP2Q9NUQ7 469 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 CISD1Q9NZ45 108 aaKnown RBP3.9□□□□□ -1.79
USP48-202ENST00000374730 GAB2Q9UQC2 676 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 FAM215AQ9Y5M1 114 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 RFNGQ9Y644 331 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 AKAP13Q12802 2813 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 BOD1L1Q8NFC6 3051 aa3.9□□□□□ -1.79
USP48-202ENST00000374730 NBEAQ8NFP9 2946 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 IGKV1D-17A0A075B6S4 117 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 IGHV3-64DA0A0J9YX35 117 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 UBE2L5PA0A1B0GUS4 154 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 MED19A0JLT2 244 aaPredicted RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 C5orf52A6NGY3 159 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 PMS2P5A8MQ11 134 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 C17orf98A8MV24 154 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 C1orf196B1AJZ1 125 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 H3BQ15 152 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 BUB3O43684 328 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 SOX15O60248 233 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 YPEL1O60688 119 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 RAMP3O60896 148 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 CLDN1O95832 211 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 LHBP01229 141 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 IFNA1P01562 189 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 MBP02144 154 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 CRYAAP02489 173 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 OR13C7P0DN81 318 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 BCL2P10415 239 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 GZMHP20718 246 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 CEACAM8P31997 349 aaPredicted RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 DUTP33316 252 aaKnown RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 SSTR5P35346 364 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 TAGLN2P37802 199 aaKnown RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 KIR2DS2P43631 304 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 GLIPR1P48060 266 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 ZNF83P51522 516 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 KLF3P57682 345 aaPredicted RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 BRWD1-AS2P59051 145 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 RBPJQ06330 500 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 ZNF816Q0VGE8 651 aaPredicted RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 PNRC1Q12796 327 aaPredicted RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 ZNF726P1Q15940 193 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 HAGHQ16775 308 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 VWC2Q2TAL6 325 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 TMEM30BQ3MIR4 351 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 Q3ZCU0 254 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 PDLIM3Q53GG5 364 aaPredicted RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 TMEM41BQ5BJD5 291 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 SPANXN5Q5MJ07 72 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 SLC35E3Q7Z769 313 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 LINC00518Q8N0U6 118 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 ZNF561Q8N587 486 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 OR2Z1Q8NG97 314 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 FAM57AQ8TBR7 257 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 FAM222BQ8WU58 562 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 SFT2D1Q8WV19 159 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 S100PBPQ96BU1 408 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 RNF183Q96D59 192 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 MUCL1Q96DR8 90 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 TVP23CQ96ET8 276 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 SDSLQ96GA7 329 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 YPEL2Q96QA6 119 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 OR4C12Q96R67 309 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 P2RX4Q99571 388 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 RARRES2Q99969 163 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 AGMATQ9BSE5 352 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 RSG1Q9BU20 258 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 TMEM147Q9BVK8 224 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 SAV1Q9H4B6 383 aaPredicted RBP3.89□□□□□ -1.79
USP48-202ENST00000374730 SIRT7Q9NRC8 400 aa3.89□□□□□ -1.79
USP48-202ENST00000374730 OR6C3Q9NZP0 311 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms