RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CT45A5P0DMU8 189 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 CT45A7P0DMV0 189 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 TNFSF4P23510 183 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 HSPE1P61604 102 aaKnown RBP13.97□□□□□ -0.17
RXRB-201ENST00000374680 STUMQ69YW2 141 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 NPVFQ9HCQ7 196 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 YTHDF2Q9Y5A9 579 aaKnown RBP13.97□□□□□ -0.17
RXRB-201ENST00000374680 XKRY2A2RUG3 117 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 RBFOX2O43251 390 aaKnown RBP eCLIP13.97□□□□□ -0.173e-9■■■■■ 37.1
RXRB-201ENST00000374680 SPINK4O60575 86 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 OR10J4P0C629 311 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 CHRNB4P30926 498 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 RPL31P62899 125 aaKnown RBP13.97□□□□□ -0.17
RXRB-201ENST00000374680 LYPD2Q6UXB3 125 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 OR2T10Q8NGZ9 312 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 PFDN5Q99471 154 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 CTDSP1Q9GZU7 261 aa13.97□□□□□ -0.17
RXRB-201ENST00000374680 WNK2Q9Y3S1 2297 aa13.96□□□□□ -0.17
RXRB-201ENST00000374680 RAI1Q7Z5J4 1906 aaPredicted RBP13.96□□□□□ -0.17
RXRB-201ENST00000374680 TRBV24-1A0A075B6N3 115 aa13.96□□□□□ -0.17
RXRB-201ENST00000374680 GAMTQ14353 236 aa13.96□□□□□ -0.17
RXRB-201ENST00000374680 C10orf55Q5SWW7 151 aa13.96□□□□□ -0.17
RXRB-201ENST00000374680 MIR17HGQ75NE6 70 aa13.96□□□□□ -0.17
RXRB-201ENST00000374680 IL19Q9UHD0 177 aa13.96□□□□□ -0.17
RXRB-201ENST00000374680 CFHR2P36980 270 aa13.96□□□□□ -0.18
RXRB-201ENST00000374680 RAB7AP51149 207 aa13.96□□□□□ -0.18
RXRB-201ENST00000374680 FAM209BQ5JX69 171 aa13.96□□□□□ -0.18
RXRB-201ENST00000374680 TEPPQ6URK8 271 aa13.96□□□□□ -0.18
RXRB-201ENST00000374680 LINC01551Q86U37 167 aa13.96□□□□□ -0.18
RXRB-201ENST00000374680 LURAP1LQ8IV03 231 aa13.96□□□□□ -0.18
RXRB-201ENST00000374680 PACRGQ96M98 296 aaPredicted RBP13.96□□□□□ -0.18
RXRB-201ENST00000374680 TMEM242Q9NWH2 141 aa13.96□□□□□ -0.18
RXRB-201ENST00000374680 SLC25A10Q9UBX3 287 aaPredicted RBP13.96□□□□□ -0.18
RXRB-201ENST00000374680 RALYQ9UKM9 306 aaKnown RBP13.96□□□□□ -0.18
RXRB-201ENST00000374680 DSCAML1Q8TD84 2053 aa13.96□□□□□ -0.18
RXRB-201ENST00000374680 SLC17A3O00476 420 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 EFNB3Q15768 340 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 ACY3Q96HD9 319 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 MRPL20Q9BYC9 149 aaKnown RBP13.95□□□□□ -0.18
RXRB-201ENST00000374680 NCOR2Q9Y618 2525 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 ARHGAP32A7KAX9 2087 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 C16orf97H3BN30 126 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 PRRG2O14669 202 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 CRYABP02511 175 aaKnown RBP13.95□□□□□ -0.18
RXRB-201ENST00000374680 TMEM108Q6UXF1 575 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 ZNF788Q6ZQV5 615 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 FAM57AQ8TBR7 257 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 CHD8Q9HCK8 2581 aa13.95□□□□□ -0.18
RXRB-201ENST00000374680 E7EUB6 86 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 LYNX1G3V0Z9 82 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 HRASP01112 189 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 LYNX1P0DP58 116 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 TIMP3P35625 211 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 GFRALQ6UXV0 394 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 OR9G1Q8NH87 305 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 HIST1H2BLQ99880 126 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 PLEKHA3Q9HB20 300 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 ANKHD1Q8IWZ3 2542 aaKnown RBP13.94□□□□□ -0.18
RXRB-201ENST00000374680 PRSS46E5RG02 174 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 OPRK1P41145 380 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 OR5I1Q13606 314 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 ADIPOQQ15848 244 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 SGMS2Q8NHU3 365 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 OCC1Q8TAD7 63 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 SRD5A3Q9H8P0 318 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 IGHV2-70P01814 119 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 REG1AP05451 166 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 IGFL3Q6UXB1 125 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 SFXN3Q9BWM7 321 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 SAP30LQ9HAJ7 183 aa13.94□□□□□ -0.18
RXRB-201ENST00000374680 A0A1B0GWJ7 208 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 ZNF705GA8MUZ8 300 aaPredicted RBP13.93□□□□□ -0.18
RXRB-201ENST00000374680 FCN3O75636 299 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 SAA1P0DJI8 122 aaPredicted RBP13.93□□□□□ -0.18
RXRB-201ENST00000374680 PSG5Q15238 335 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 CR1LQ2VPA4 569 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 FAM169BQ8N8A8 192 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 OR2T6Q8NHC8 308 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 IGKV1OR2-108A0A075B7D4 117 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 IGHV3-21A0A0B4J1V1 117 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 MKRN2OSH3BPM6 223 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 PHOX2AO14813 284 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 OR7C2O60412 319 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 OR10J1P30954 320 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 CEACAM8P31997 349 aaPredicted RBP13.93□□□□□ -0.18
RXRB-201ENST00000374680 HARBI1Q96MB7 349 aa13.93□□□□□ -0.18
RXRB-201ENST00000374680 MAP1AP78559 2803 aaPredicted RBP13.92□□□□□ -0.18
RXRB-201ENST00000374680 F6UZH7 168 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 ENSAO43768 121 aaKnown RBP13.92□□□□□ -0.18
RXRB-201ENST00000374680 FRMD6-AS1P0C7T7 363 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 STAG3L2P0CL84 134 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 STAG3L3P0CL85 134 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 GCHFRP30047 84 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 SLC35B1P78383 322 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 HLA-DRB5Q30154 266 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 IMMP2LQ96T52 175 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 TMEM14BQ9NUH8 114 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 TEX50A0A1B0GTY4 177 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 IL3RAP26951 378 aa13.92□□□□□ -0.18
RXRB-201ENST00000374680 FOXC1Q12948 553 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms